Alias: ACDOP11_14344.13494.24
name | lists | location/seqs | annotations | notes |
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ACDOP11_53_1
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(39..1034)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=193 to=225)
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=262)
transmembrane_regions (db=TMHMM db_id=tmhmm from=283 to=305)
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ACDOP11_53_2
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1027..1953)
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miaA; tRNA delta-2-isopentenylpyrophosphate transferase
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=8 to=292 evalue=4.0e-40 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
IPPT (db=HMMPfam db_id=PF01715 from=42 to=288 evalue=1.2e-38 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED (db=HMMPanther db_id=PTHR11088 from=40 to=305 evalue=3.8e-31 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
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ACDOP11_53_3
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2130..3281)
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tRNA-i(6)A37 thiotransferase enzyme MiaB
seg (db=Seg db_id=seg from=326 to=337)
MTTASE_RADICAL (db=PatternScan db_id=PS01278 from=124 to=144 evalue=0.0 interpro_id=IPR020612 interpro_description=Methylthiotransferase, conserved site GO=Cellular Component: cellular_component (GO:0005575), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
TIGR00089: RNA modification enzyme, MiaB fa (db=HMMTigr db_id=TIGR00089 from=3 to=383 evalue=2.3e-102 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
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ACDOP11_53_4
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3281..3556)
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Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=90 evalue=6.2e-18 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
IHF-like DNA-binding proteins (db=superfamily db_id=SSF47729 from=1 to=91 evalue=6.4e-17 interpro_id=IPR010992 interpro_description=IHF-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:4.10.520.10 from=1 to=90 evalue=2.2e-13 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=91 evalue=8.1e-08 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
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ACDOP11_53_5
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3643..5199)
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hypothetical protein
coiled-coil (db=Coil db_id=coil from=81 to=154 evalue=NA)
seg (db=Seg db_id=seg from=48 to=62)
seg (db=Seg db_id=seg from=120 to=143)
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ACDOP11_53_6
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(5353..5829)
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regulatory protein RecX; K03565 regulatory protein (db=KEGG evalue=2.0e-09 bit_score=64.3 identity=35.46 coverage=82.3899371069182)
RecX (db=HMMPfam db_id=PF02631 from=48 to=153 evalue=2.3e-18 interpro_id=IPR003783 interpro_description=Regulatory protein RecX GO=Biological Process: regulation of DNA repair (GO:0006282))
RecX (db=HAMAP db_id=MF_01114 from=2 to=158 evalue=11.582)
Regulatory protein RecX Tax=GWA2_OP11_42_17
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ACDOP11_53_7
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(5804..6859)
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Protein RecA
Protein RecA
Protein recA n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SPJ7_9FIRM (db=UNIREF evalue=7.0e-109 bit_score=397.0 identity=64.72 coverage=87.5)
seg (db=Seg db_id=seg from=149 to=166)
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G lov BLASTP only 65% identity
Jill Banfield
(11/17/12)
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ACDOP11_53_8
ACD61, ACD61, ACD61, ACD61, Microgenomates, Bacteria
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Not on your lists |
comp(7147..8316)
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hypothetical protein (db=KEGG evalue=6.0e-18 bit_score=95.5 identity=41.3 coverage=44.8717948717949)
seg (db=Seg db_id=seg from=89 to=98)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=235 to=242)
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ACDOP11_53_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(8387..8956)
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hypothetical protein (db=KEGG evalue=3.0e-23 bit_score=111.0 identity=39.72 coverage=72.6315789473684)
Peptidase C60 sortase A and B n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L0J9_EXISA (db=UNIREF evalue=5.0e-23 bit_score=110.0 identity=38.32 coverage=85.2631578947368)
seg (db=Seg db_id=seg from=2 to=15)
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ACDOP11_53_10
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(9425..10588)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=344 to=366)
transmembrane_regions (db=TMHMM db_id=tmhmm from=301 to=323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=297)
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ACDOP11_53_11
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria
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Not on your lists |
comp(10646..11587)
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NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] (db=KEGG evalue=2.0e-117 bit_score=425.0 identity=64.72 coverage=97.1337579617834)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=313 evalue=1.4e-151)
DTDP-GLUCOSE 4-6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF35 from=5 to=313 evalue=1.4e-151)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=313 evalue=1.4e-84)
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ACDOP11_53_12
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(11563..12492)
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SH3 type 3 domain-containing protein
seg (db=Seg db_id=seg from=10 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
no description (db=HMMSmart db_id=SM00854 from=46 to=263 evalue=6.0e-66 interpro_id=IPR019079 interpro_description=Capsule synthesis protein, CapA)
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ACDOP11_53_13
RIFOXYC2_FULL_OP11_Collierbacteria_43_15_curated, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(12499..13425)
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Zn-dependent exopeptidases (db=superfamily db_id=SSF53187 from=54 to=181 evalue=5.0e-14)
Peptidase_M14 (db=HMMPfam db_id=PF00246 from=59 to=216 evalue=8.6e-05 interpro_id=IPR000834 interpro_description=Peptidase M14, carboxypeptidase A GO=Molecular Function: metallocarboxypeptidase activity (GO:0004181), Biological Process: proteolysis (GO:0006508), Molecular Function: zinc ion binding (GO:0008270))
Tax=RIFOXYC2_FULL_OP11_Collierbacteria_43_15_curated
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ACDOP11_53_14
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(13445..13540)
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Ribosomal_S9 (db=HMMPfam db_id=PF00380 from=2 to=31 evalue=6.4e-05 interpro_id=IPR000754 interpro_description=Ribosomal protein S9 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S ribosomal protein S9 {ECO:0000313|EMBL:KKS43326.1}; TaxID=1618378 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWA2_42_17.;"
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