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ACDOP11_55

Alias: ACDOP11_69948.7848.10

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_55_1
OP11_3, OP11_3, OP11_3, OP11_3, Microgenomates, Bacteria

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comp(1..3180)
DNA (3180bp) protein (1060aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=294)
transmembrane_regions (db=TMHMM db_id=tmhmm from=301 to=323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=347 to=366)
ACDOP11_55_2
Clostridium papyrosolvens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3217..3975)
DNA (759bp) protein (253aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ICM8_9CLOT (db=UNIREF evalue=2.0e-22 bit_score=109.0 identity=33.33 coverage=93.2806324110672)
glycosyl transferase family 2 (db=KEGG evalue=4.0e-15 bit_score=85.1 identity=25.91 coverage=85.7707509881423)
seg (db=Seg db_id=seg from=48 to=67)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=213 evalue=3.1e-37)
ACDOP11_55_3
R_OP11_Levybacteria_37_11, Levybacteria, Microgenomates, Bacteria

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comp(4673..5440)
DNA (768bp) protein (256aa)
pin/tram domain protein
PIN domain-like (db=superfamily db_id=SSF88723 from=61 to=188 evalue=5.6e-16)
no description (db=HMMSmart db_id=SM00670 from=59 to=168 evalue=5.0e-08 interpro_id=IPR006596 interpro_description=Nucleotide binding protein, PINc)
no description (db=Gene3D db_id=G3DSA:3.40.50.1010 from=57 to=186 evalue=0.00024)
ACDOP11_55_4
GWA1_OP11_39_34, Levybacteria, Microgenomates, Bacteria

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comp(5433..6431)
DNA (999bp) protein (333aa)
DNA repair protein RadA
DNAREPAIRADA (db=FPrintScan db_id=PR01874 from=63 to=87 evalue=8.8e-56 interpro_id=IPR004504 interpro_description=DNA repair protein RadA GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
DNAREPAIRADA (db=FPrintScan db_id=PR01874 from=12 to=29 evalue=8.8e-56 interpro_id=IPR004504 interpro_description=DNA repair protein RadA GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
DNAREPAIRADA (db=FPrintScan db_id=PR01874 from=102 to=130 evalue=8.8e-56 interpro_id=IPR004504 interpro_description=DNA repair protein RadA GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACDOP11_55_5
GWA1_OP11_39_34, Levybacteria, Microgenomates, Bacteria

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comp(6789..7865)
DNA (1077bp) protein (359aa)
30S ribosomal protein S1
seg (db=Seg db_id=seg from=107 to=122)
seg (db=Seg db_id=seg from=62 to=71)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=194 to=282 evalue=1.3e-23 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
Displaying 5 items

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