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gwe1_scaffold_649

Alias: GWE1_WS6_33_547_5

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_649_1
WS6_GWF1_33_233, WS6, Bacteria

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comp(1..1098)
DNA (1098bp) protein (366aa)
Putative membrane protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GIF1_CLOLD
Uncharacterized protein {ECO:0000313|EMBL:KKP45691.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
gwe1_scaffold_649_2

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comp(1076..2053)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTG5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP55250.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Integral membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
gwe1_scaffold_649_3

Not on your lists

comp(2040..2951)
DNA (912bp) protein (304aa)
Glycosyl transferase family 2 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDS2_ARCPA
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKP55249.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
family 2 glycosyl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
gwe1_scaffold_649_4
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(3027..3848)
DNA (822bp) protein (274aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45688.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=24 to=44)
gwe1_scaffold_649_5

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3954..4478
DNA (525bp) protein (175aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Probable deoxycytidine triphosphate deaminase n=3 Tax=Methanobrevibacter smithii RepID=DCD_METS3
Putative deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:KKP55247.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
dUTPase-like (db=superfamily db_id=SSF51283 from=1 to=173 evalue=1.1e-21)
gwe1_scaffold_649_6
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(4531..4908)
DNA (378bp) protein (126aa)
Uncharacterized protein n=5 Tax=Methanosarcinaceae RepID=Q8PZF7_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKP45686.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
mannose-6-phosphate isomerase
RmlC-like cupins (db=superfamily db_id=SSF51182 from=3 to=108 evalue=1.9e-21 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
gwe1_scaffold_649_7

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5030..5500
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55245.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_649_8
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(5506..5946)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45684.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=4 to=17)
gwe1_scaffold_649_9

Not on your lists

6032..6841
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55243.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_649_10
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

6937..8103
DNA (1167bp) protein (389aa)
Cysteine desulfurase NifS, cysteine desulfurase {ECO:0000313|EMBL:KKP45682.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KKP45682.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate d
Cysteine desulfurase n=2 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LU59_CLOCD rbh
cysteine desulfurase NifS
AA_TRANSFER_CLASS_5 (db=PatternScan db_id=PS00595 from=194 to=213 evalue=0.0 interpro_id=IPR020578 interpro_description=Aminotransferase class-V pyridoxal-phosphate binding site)
gwe1_scaffold_649_11
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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8108..8491
DNA (384bp) protein (128aa)
FeS cluster assembly scaffold protein NifU n=6 Tax=Clostridium thermocellum RepID=A3DDC7_CLOTH
FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFOXYB1_FULL_WS6_33_15_curated
FeS cluster assembly scaffold protein NifU
IRON-SULFUR CLUSTER ASSEMBLY ENZYME (NIFU HOMOLOG) (db=HMMPanther db_id=PTHR10093 from=1 to=122 evalue=1.3e-58)
gwe1_scaffold_649_12
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

8475..9542
DNA (1068bp) protein (356aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, tRNA-specific 2-thiouridylase {ECO:0000313|EMBL:KKP45680.1}; EC=2.1.1.61 {ECO:0000313|EMBL:KKP45680.1};; EC=2.8.1.- {ECO:0000313|EMBL:KKP4
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LU57_CLOCD rbh
seg (db=Seg db_id=seg from=172 to=185)
gwe1_scaffold_649_13
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

9606..10367
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Mesotoga RepID=I2F692_9THEM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP82202.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwe1_scaffold_649_14
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

10441..10947
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45678.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=125 to=136)
gwe1_scaffold_649_15
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(10949..11572)
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45677.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
coiled-coil (db=Coil db_id=coil from=15 to=36 evalue=NA)
gwe1_scaffold_649_16
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

11666..12292
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPW1_METH6
Uncharacterized protein {ECO:0000313|EMBL:KKP45676.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
gwe1_scaffold_649_17
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

12325..12708
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45675.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
gwe1_scaffold_649_18

Not on your lists

12786..13574
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55234.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
HAD-like (db=superfamily db_id=SSF56784 from=18 to=262 evalue=1.1e-17 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=15 to=262 evalue=1.2e-06 interpro_id=IPR023214 interpro_description=HAD-like domain)
(db=HMMPfam db_id=PF00702 from=23 to=223 evalue=2.4e-09 interpro_id=IPR005834 interpro_description=Haloacid dehalogenase-like hydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
gwe1_scaffold_649_19
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(13571..14908)
DNA (1338bp) protein (446aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=human gut metagenome RepID=K1SBC2_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP45673.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
seg (db=Seg db_id=seg from=275 to=288)
gwe1_scaffold_649_20

Not on your lists

comp(14989..16509)
DNA (1521bp) protein (507aa)
ATPase component of ABC transporters with duplicated ATPase domain n=1 Tax=actinobacterium SCGC AAA027-L06 RepID=J9HGW8_9ACTN rbh
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKP55232.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
multidrug ABC transporter ATP-binding protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=417 to=431 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
gwe1_scaffold_649_21

Not on your lists

16592..17206
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCV5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKP55231.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=102 to=148 evalue=NA)
gwe1_scaffold_649_22
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

17256..17747
DNA (492bp) protein (164aa)
Peptide deformylase, peptide deformylase {ECO:0000313|EMBL:KKP45670.1}; EC=3.5.1.88 {ECO:0000313|EMBL:KKP45670.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate divisio
formylmethionine deformylase n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248FCC6
polypeptide deformylase
POLYPEPTIDE DEFORMYLASE (db=HMMPanther db_id=PTHR10458 from=10 to=163 evalue=1.5e-29 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: peptide deformylase activity (GO:0042586))
gwe1_scaffold_649_23
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

17808..18977
DNA (1170bp) protein (390aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45669.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=261 to=283)
seg (db=Seg db_id=seg from=4 to=19)
gwe1_scaffold_649_24
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(19096..20877)
DNA (1782bp) protein (594aa)
Putative ABC transporter substrate binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N400_ANATU
Uncharacterized protein {ECO:0000313|EMBL:KKP82191.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
putative ABC transporter substrate binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=80)
Displaying 24 items

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