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gwd1_scaffold_468

Alias: GWD1_Treponema_61_31_143

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwd1_scaffold_468_1
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

2..337
DNA (336bp) protein (112aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
polynucleotide phosphorylase/polyadenylase
gwd1_scaffold_468_2
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

373..1296
DNA (924bp) protein (308aa)
transmembrane_regions 55..77 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwd1_scaffold_468_3
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

1289..2362
DNA (1074bp) protein (358aa)
Lon protease {ECO:0000313|EMBL:KKS03496.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Lon protease
gwd1_scaffold_468_4
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

2364..2993
DNA (630bp) protein (210aa)
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:KKS03495.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Phage SPO1 DNA polymerase-related protein
gwd1_scaffold_468_5
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

3003..4727
DNA (1725bp) protein (575aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Metallo-beta-lactamase
gwd1_scaffold_468_6
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

4811..7063
DNA (2253bp) protein (751aa)
FtsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Cell divisionFtsK/SpoIIIE
gwd1_scaffold_468_7
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

7086..7340
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03492.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_468_8
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(7341..8348)
DNA (1008bp) protein (336aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Peptide chain release factor 2
gwd1_scaffold_468_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(8377..10941)
DNA (2565bp) protein (855aa)
CLPC2; chaperone, Hsp100 family, ClpC-type; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Chaperone, Hsp100 family, ClpC-type
gwd1_scaffold_468_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(10954..11394)
DNA (441bp) protein (147aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Signal sequence peptidase
gwd1_scaffold_468_11
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(11418..12005)
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03488.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwd1_scaffold_468_12

Not on your lists

comp(12002..12691)
DNA (690bp) protein (230aa)
DNA repair protein RadC {ECO:0000313|EMBL:EKD85827.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
radC; DNA repair protein RadC
UPF0758 protein NT01CX_1687
gwd1_scaffold_468_13
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

12754..13029
DNA (276bp) protein (92aa)
lambda repressor-like DNA-binding domains 1..66 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
DNA-binding helix-turn-helix protein
gwd1_scaffold_468_14
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists


comp(13026..13460)
DNA (435bp) protein (145aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKS03485.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
30S ribosomal protein S9
gwd1_scaffold_468_15
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


comp(13463..13885)
DNA (423bp) protein (141aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
rplM; 50S ribosomal protein L13
50S ribosomal protein L13
gwd1_scaffold_468_16
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


comp(13875..14348)
DNA (474bp) protein (158aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17
gwd1_scaffold_468_17
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(14366..15286)
DNA (921bp) protein (307aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKS03482.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha
gwd1_scaffold_468_18
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists


comp(15306..15908)
DNA (603bp) protein (201aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFOXYC1_FULL_WWE3_42_13_curated
hypothetical protein
30S ribosomal protein S4
gwd1_scaffold_468_19
GWB1_WWE3_42_6, WWE3, Bacteria

Not on your lists


comp(15913..16302)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 {ECO:0000313|EMBL:KKS66783.1}; TaxID=1619115 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB1_42_6.;"
hypothetical protein
30S ribosomal protein S11
gwd1_scaffold_468_20
GWF1_WWE3_42_14_plus, WWE3, Bacteria

Not on your lists


comp(16319..16705)
DNA (387bp) protein (129aa)
Ribosomal protein S13p/S18e {ECO:0000313|EMBL:KKS39515.1}; TaxID=1619138 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWF1_42_14.;"
Ribosomal protein S13
Ribosomal protein S13p/S18e
gwd1_scaffold_468_21
GWB1_WWE3_42_6, WWE3, Bacteria

Not on your lists

comp(16851..17069)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 {ECO:0000313|EMBL:KKS66785.1}; TaxID=1619115 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB1_42_6.;"
infA; translation initiation factor IF-1
Translation initiation factor IF-1
gwd1_scaffold_468_22
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

17263..18546
DNA (1284bp) protein (428aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFOXYC1_FULL_WWE3_42_13_curated
hypothetical protein
Serine--tRNA ligase
gwd1_scaffold_468_23
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

18563..19252
DNA (690bp) protein (230aa)
putative spermine/spermidine synthase protein (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] Tax=RIFOXYC1_FULL_WWE3_42_13_curated
hypothetical protein
Spermidine synthase
gwd1_scaffold_468_24
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

19262..20098
DNA (837bp) protein (279aa)
UDP-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFOXYC1_FULL_WWE3_42_13_curated
UDP-diphosphatase
UDP-diphosphatase
gwd1_scaffold_468_25
GWB1_WWE3_42_6, WWE3, Bacteria

Not on your lists

20137..22200
DNA (2064bp) protein (688aa)
Protein translocase subunit SecA {ECO:0000313|EMBL:KKS66789.1}; TaxID=1619115 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB1_42_6.;"
hypothetical protein
Protein translocase subunit SecA
Displaying 25 items

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