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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 1-50 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_165 ACD18_155829.2694.4
Species: uncultured bacterium (100%)
1 2728 bp 33.14 1.00 10.34
done Jill Banfield (11/15/12)
ACD18_169 ACD18_123462.2626.4
Species: uncultured bacterium (100%)
1 2660 bp 32.03 1.00 52.78
done Jill Banfield (11/15/12)
ACD18_177 ACD18_220755.2170.4
Species: uncultured bacterium (100%)
1 2204 bp 33.94 1.00 43.83
done Jill Banfield (11/15/12)
ACD18_183 ACD18_4624.2955.17
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
1 2995 bp 38.40 1.00 99.97
done Jill Banfield (11/15/12)
ACD18_188 ACD18_61952.2100.5
Species: uncultured bacterium (100%)
1 2134 bp 28.35 1.00 94.89
done Jill Banfield (11/15/12)
ACD18_68 ACD18_35665.4021.5
Species: uncultured bacterium (100%)
2 4055 bp 33.76 1.00 39.51
done Jill Banfield (11/15/12)
ACD18_74 ACD18_123610.2209.5
Species: uncultured bacterium (100%)
2 2243 bp 32.68 1.00 92.82
done Jill Banfield (11/15/12)
ACD18_86 ACD18_29943.2094.6
Species: uncultured bacterium (100%)
2 2128 bp 33.55 1.00 97.13
done Jill Banfield (11/15/12)
ACD18_87 ACD18_3491.2369.6
Species: uncultured bacterium (100%)
2 2403 bp 28.92 1.00 77.78
done Jill Banfield (11/15/12)
ACD18_104 ACD18_1209.1972.22
Species: uncultured bacterium (100%)
2 2018 bp 31.32 1.00 94.10
done Jill Banfield (11/15/12)
ACD18_113 ACD18_505.2402.21
Species: uncultured bacterium (50%)
2 2448 bp 31.05 1.00 91.91
done Jill Banfield (11/15/12)
ACD18_119 ACD18_95585.2038.5
Species: uncultured bacterium (100%)
2 2072 bp 33.35 1.00 90.06
done Jill Banfield (11/15/12)
ACD18_123 ACD18_380992.2756.5
Species: R_OD1_Magasanikbacteria_44_11 (50%)
2 2790 bp 27.17 1.00 69.89
done Jill Banfield (11/15/12)
ACD18_134 ACD18_11362.2160.5
Species: ACD18 (50%)
2 2194 bp 28.81 1.00 100.09
done Jill Banfield (11/15/12)
ACD18_156 ACD18_79175.2781.4
Species: uncultured bacterium (50%)
2 2815 bp 33.14 1.00 75.45
done Jill Banfield (11/15/12)
ACD18_162 ACD18_894.2224.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 2264 bp 36.09 1.00 94.21
done Jill Banfield (11/15/12)
ACD18_163 ACD18_23163.2086.5
Species: uncultured bacterium (100%)
2 2120 bp 31.70 1.00 88.16
add Jill Banfield (11/15/12)
ACD18_168 ACD18_354327.4380.4
Species: RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated (50%)
2 4414 bp 38.17 1.00 94.81
done Jill Banfield (11/15/12)
ACD18_173 ACD18_26051.2011.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 2051 bp 32.03 1.00 44.90
done Jill Banfield (11/15/12)
ACD18_174 ACD18_10983.4596.19
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 4636 bp 33.69 1.00 96.23
done Jill Banfield (11/15/12)
ACD18_175 ACD18_31582.2459.5
Species: uncultured bacterium (100%)
2 2493 bp 33.61 1.00 96.87
done Jill Banfield (11/15/12)
ACD18_180 ACD18_118882.3866.6
Species: uncultured bacterium (100%)
2 3900 bp 35.41 1.00 65.54
done Jill Banfield (11/15/12)
ACD18_181 ACD18_225592.2180.5
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 2214 bp 31.48 1.00 62.87
done Jill Banfield (11/15/12)
ACD18_182 ACD18_6286.2675.20
Species: uncultured bacterium (100%)
2 2715 bp 36.46 1.00 95.47
done Jill Banfield (11/15/12)
ACD18_184 ACD18_3910.3311.23
Species: uncultured bacterium (100%)
2 3351 bp 33.69 1.00 83.89
done Jill Banfield (11/15/12)
ACD18_187 ACD18_55429.1982.6
Species: uncultured bacterium (100%)
2 2016 bp 30.61 1.00 99.55
done Jill Banfield (11/15/12)
ACD18_31 ACD18_87053.2788.6
Species: uncultured bacterium (100%)
3 2822 bp 29.20 1.00 74.20
done Jill Banfield (11/15/12)
ACD18_42 ACD18_326662.2070.4
Species: uncultured bacterium (66.67%)
3 2104 bp 30.18 1.00 62.02
done Jill Banfield (11/15/12)
ACD18_46 ACD18_24211.2319.5
Species: uncultured bacterium (100%)
3 2353 bp 33.74 1.00 84.28
done Jill Banfield (11/15/12)
ACD18_52 ACD18_187606.2435.4
Species: uncultured bacterium (66.67%)
3 2469 bp 28.96 1.00 39.49
done Jill Banfield (11/15/12)
ACD18_59 ACD18_28437.2186.5
Species: uncultured bacterium (100%)
3 2220 bp 31.13 1.00 92.57
done Jill Banfield (11/15/12)
ACD18_60 ACD18_87037.2318.5
Species: uncultured bacterium (100%)
3 2352 bp 32.99 1.00 66.96
done Jill Banfield (11/15/12)
ACD18_65 ACD18_144155.2125.5
Species: uncultured bacterium (100%)
3 2159 bp 27.93 1.00 82.12
done Jill Banfield (11/15/12)
ACD18_73 ACD18_107428.2116.5
Species: uncultured bacterium (66.67%)
3 2150 bp 30.56 1.00 93.35
done Jill Banfield (11/15/12)
ACD18_80 ACD18_789.11094.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 11134 bp 34.17 1.00 95.11
done Jill Banfield (11/15/12)
ACD18_88 ACD18_8348.2323.23
Phylum: Parcubacteria (66.67%)
3 2363 bp 33.31 1.00 74.02
done Jill Banfield (11/15/12)
ACD18_95 ACD18_252955.2603.4
Species: uncultured bacterium (100%)
3 2637 bp 32.61 1.00 37.54
done Jill Banfield (11/15/12)
ACD18_106 ACD18_435139.2174.4
Class: Magasanikbacteria (66.67%)
3 2208 bp 31.52 1.00 80.84
done Jill Banfield (11/15/12)
ACD18_111 ACD18_155115.3404.7
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 3438 bp 31.68 1.00 91.27
done Jill Banfield (11/15/12)
ACD18_112 ACD18_1200.3006.21
Species: uncultured bacterium (66.67%)
3 3046 bp 30.86 1.00 55.15
done Jill Banfield (11/15/12)
ACD18_114 ACD18_103789.3452.5
Species: uncultured bacterium (100%)
3 3486 bp 30.92 1.00 57.83
done Jill Banfield (11/15/12)
ACD18_116 ACD18_13308.2953.6
Species: uncultured bacterium (100%)
3 2987 bp 29.90 1.00 91.60
done Jill Banfield (11/15/12)
ACD18_127 ACD18_3962.2951.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 2997 bp 29.20 1.00 62.96
done Jill Banfield (11/15/12)
ACD18_130 ACD18_297594.3094.5
Class: Magasanikbacteria (66.67%)
3 3128 bp 31.46 1.00 80.66
done Jill Banfield (11/15/12)
ACD18_131 ACD18_204065.1999.6
Species: uncultured bacterium (100%)
3 2033 bp 30.15 1.00 69.21
done Jill Banfield (11/15/12)
ACD18_138 ACD18_89878.2590.5
Species: uncultured bacterium (66.67%)
3 2624 bp 30.41 1.00 85.06
done Jill Banfield (11/15/12)
ACD18_142 ACD18_45421.2433.5
Species: uncultured bacterium (100%)
3 2467 bp 30.77 1.00 94.49
done Jill Banfield (11/15/12)
ACD18_144 ACD18_193976.2688.5
Species: uncultured bacterium (66.67%)
3 2722 bp 31.63 1.00 79.46
done Jill Banfield (11/15/12)
ACD18_148 ACD18_235991.2129.4
Class: Magasanikbacteria (66.67%)
3 2163 bp 29.26 1.00 47.71
done Jill Banfield (11/15/12)
ACD18_153 ACD18_305239.2954.6
Species: uncultured bacterium (66.67%)
3 2988 bp 32.76 1.00 99.40
done Jill Banfield (11/15/12)
Displaying items 1-50 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.