ggKbase home page
Advanced Search
Search Help

ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 1-50 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_39 ACD18_7129.39938.22
Species: uncultured bacterium (54.05%)
37 39978 bp 31.03 1.00 91.06
done Jill Banfield (11/15/12)
ACD18_23 ACD18_242.30582.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75.68%)
37 30622 bp 31.47 1.00 90.12
done Jill Banfield (11/15/12)
ACD18_43 ACD18_983.37538.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.14%)
35 37578 bp 32.35 1.00 88.71
done Jill Banfield (11/15/12)
ACD18_30 ACD18_770.43352.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
33 43392 bp 30.20 1.00 92.26
done Jill Banfield (11/15/12)
ACD18_47 ACD18_11328.16293.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (59.26%)
27 16333 bp 32.54 1.00 87.63
done Jill Banfield (11/15/12)
ACD18_49 ACD18_21787.35852.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80.77%)
26 35892 bp 31.75 1.00 93.44
done Jill Banfield (11/15/12)
ACD18_29 ACD18_215.21151.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60.87%)
23 21191 bp 31.68 1.00 84.76
done Jill Banfield (11/15/12)
ACD18_18 ACD18_38417.22030.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (65.22%)
23 22070 bp 32.81 1.00 83.23
done Jill Banfield (11/15/12)
ACD18_36 ACD18_1371.18886.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (63.64%)
22 18926 bp 33.21 1.00 91.72
done Jill Banfield (11/15/12)
ACD18_55 ACD18_736.26253.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85%)
20 26293 bp 32.18 1.00 84.07
done Jill Banfield (11/15/12)
ACD18_11 ACD18_2064.29034.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (55%)
20 29074 bp 31.97 1.00 88.44
done Jill Banfield (11/15/12)
ACD18_102 ACD18_10047.22122.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
18 22162 bp 32.74 1.00 84.85
done Jill Banfield (11/15/12)
ACD18_124 ACD18_3366.20210.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
18 20250 bp 30.85 1.00 88.71
done Jill Banfield (11/15/12)
ACD18_21 ACD18_1350.16600.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (76.47%)
17 16640 bp 31.62 1.00 84.28
done Jill Banfield (11/15/12)
ACD18_108 ACD18_384.14474.23
Species: uncultured bacterium (53.33%)
15 14514 bp 33.17 1.00 89.56
done Jill Banfield (11/15/12)
ACD18_125 ACD18_679.13138.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (86.67%)
15 13178 bp 32.08 1.00 89.13
done Jill Banfield (11/15/12)
ACD18_4 ACD18_1947.11272.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (73.33%)
15 11318 bp 32.74 1.00 75.17
done Jill Banfield (11/15/12)
ACD18_34 ACD18_26347.11769.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (78.57%)
14 11809 bp 33.83 1.00 66.05
done Jill Banfield (11/15/12)
ACD18_101 ACD18_16097.13827.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (57.14%)
14 13867 bp 30.99 1.00 89.33
done Jill Banfield (11/15/12)
ACD18_5 ACD18_3293.13731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (78.57%)
14 13771 bp 33.64 1.00 79.43
done Jill Banfield (11/15/12)
ACD18_10 ACD18_2235.12250.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (57.14%)
14 12290 bp 32.01 1.00 89.46
done Jill Banfield (11/15/12)
ACD18_71 ACD18_25181.16825.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (69.23%)
13 16865 bp 32.43 1.00 88.59
done Jill Banfield (11/15/12)
ACD18_83 ACD18_3623.14081.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (92.31%)
13 14121 bp 32.55 1.00 76.23
done Jill Banfield (11/15/12)
ACD18_57 ACD18_359.11295.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
12 11335 bp 33.33 1.00 88.53
done Jill Banfield (11/15/12)
ACD18_89 ACD18_1427.10203.24
Species: uncultured bacterium (58.33%)
12 10243 bp 33.39 1.00 85.61
done Jill Banfield (11/15/12)
ACD18_91 ACD18_1113.13521.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
12 13561 bp 31.32 1.00 91.65
done Jill Banfield (11/15/12)
ACD18_17 ACD18_7077.13457.22
Species: uncultured bacterium (66.67%)
12 13497 bp 32.53 1.00 82.91
done Jill Banfield (11/15/12)
ACD18_35 ACD18_1638.8791.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
11 8831 bp 31.04 1.00 83.87
done Jill Banfield (11/15/12)
ACD18_37 ACD18_2878.11776.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 11816 bp 32.60 1.00 83.00
done Jill Banfield (11/15/12)
ACD18_79 ACD18_11569.7448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 7488 bp 33.44 1.00 72.32
done Jill Banfield (11/15/12)
ACD18_92 ACD18_602.13243.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (54.55%)
11 13283 bp 32.40 1.00 88.96
done Jill Banfield (11/15/12)
ACD18_100 ACD18_573.7598.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (81.82%)
11 7638 bp 34.07 1.00 74.12
done Jill Banfield (11/15/12)
ACD18_48 ACD18_2326.9685.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (70%)
10 9731 bp 30.84 1.00 78.46
done Jill Banfield (11/15/12)
ACD18_64 ACD18_307.15662.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (90%)
10 15702 bp 32.38 1.00 94.44
done Jill Banfield (11/15/12)
ACD18_166 ACD18_1803.12972.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
10 13012 bp 32.69 1.00 93.19
done Jill Banfield (11/15/12)
ACD18_27 ACD18_12617.17542.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
10 17582 bp 34.70 1.00 88.61
done Jill Banfield (11/15/12)
ACD18_38 ACD18_41.6488.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (88.89%)
9 6528 bp 32.29 1.00 73.99
done Jill Banfield (11/15/12)
ACD18_45 ACD18_3661.11636.21
Species: uncultured bacterium (100%)
9 11682 bp 28.64 1.00 82.92
done Jill Banfield (11/15/12)
ACD18_50 ACD18_361.7203.23
Species: uncultured bacterium (55.56%)
9 7243 bp 30.10 1.00 81.43
done Jill Banfield (11/15/12)
ACD18_53 ACD18_19173.9357.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (55.56%)
9 9397 bp 31.93 1.00 77.29
done Jill Banfield (11/15/12)
ACD18_77 ACD18_863.12635.23
Species: uncultured bacterium (55.56%)
9 12675 bp 32.64 1.00 93.04
done Jill Banfield (11/15/12)
ACD18_96 ACD18_1277.7831.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 7871 bp 30.78 1.00 93.69
done Jill Banfield (11/15/12)
ACD18_159 ACD18_10029.6640.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 6686 bp 30.93 1.00 66.77
done Jill Banfield (11/15/12)
ACD18_160 ACD18_8502.8395.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
9 8441 bp 30.45 1.00 64.19
done Jill Banfield (11/15/12)
ACD18_69 ACD18_39129.5736.6
Species: uncultured bacterium (87.5%)
8 5770 bp 34.35 1.00 71.07
done Jill Banfield (11/15/12)
ACD18_76 ACD18_2950.6737.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (87.5%)
8 6783 bp 29.51 1.00 88.77
done Jill Banfield (11/15/12)
ACD18_137 ACD18_824.12024.21
Species: uncultured bacterium (75%)
8 12064 bp 34.30 1.00 88.83
done Jill Banfield (11/15/12)
ACD18_2 ACD18_20827.9510.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (62.5%)
8 9550 bp 33.45 1.00 82.08
done Jill Banfield (11/15/12)
ACD18_8 ACD18_60.4906.23
Species: uncultured bacterium (75%)
8 4952 bp 29.89 1.00 91.11
done Jill Banfield (11/15/12)
ACD18_41 ACD18_425.5690.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85.71%)
7 5730 bp 32.84 1.00 96.18
done Jill Banfield (11/15/12)
Displaying items 1-50 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.