ggKbase home page

ACD18_27

Alias: ACD18_12617.17542.22

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_27_1

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)
Phosphoglycerate kinase
PHOSPHOGLYCERATE KINASE (db=HMMPanther db_id=PTHR11406 from=1 to=82 evalue=8.0e-22 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
Phosphoglycerate kinase (db=superfamily db_id=SSF53748 from=1 to=82 evalue=3.0e-21 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
PGK (db=HMMPfam db_id=PF00162 from=3 to=81 evalue=2.7e-20 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
ACD18_27_2

Not on your lists

comp(450..1460)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJQ0_9ACTN (db=UNIREF evalue=2.0e-109 bit_score=399.0 identity=58.01 coverage=97.6261127596439)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
GAPDH-I: glyceraldehyde-3-phosphate dehydrog (db=HMMTigr db_id=TIGR01534 from=6 to=328 evalue=8.8e-179 interpro_id=IPR006424 interpro_description=Glyceraldehyde-3-phosphate dehydrogenase, type I GO=Biological Process: glucose metabolic process (GO:0006006), Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
ACD18_27_3

Not on your lists

1586..2077
DNA (492bp) protein (164aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97)
ACD18_27_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

2249..3478
DNA (1230bp) protein (410aa)
seg (db=Seg db_id=seg from=366 to=378)
seg (db=Seg db_id=seg from=326 to=342)
coiled-coil (db=Coil db_id=coil from=300 to=342 evalue=NA)
coiled-coil 300..342 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_27_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3540..4037)
DNA (498bp) protein (166aa)
crossover junction endodeoxyribonuclease RuvC
seg (db=Seg db_id=seg from=144 to=154)
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=6 to=165 evalue=4.4e-48)
RuvC (db=HMMPfam db_id=PF02075 from=8 to=155 evalue=1.3e-47 interpro_id=IPR002176 interpro_description=Crossover junction endodeoxyribonuclease RuvC GO=Molecular Function: endodeoxyribonuclease activity (GO:0004520), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD18_27_6
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4193..4921)
DNA (729bp) protein (243aa)
hypothetical protein
seg (db=Seg db_id=seg from=84 to=95)
DUF28 (db=HMMPfam db_id=PF01709 from=5 to=240 evalue=5.9e-81 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
TIGR01033: DNA-binding regulatory protein, (db=HMMTigr db_id=TIGR01033 from=1 to=242 evalue=9.3e-80 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
ACD18_27_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5237..9157)
DNA (3921bp) protein (1307aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium acetobutylicum RepID=RPOC_CLOAB (db=UNIREF evalue=0.0 bit_score=1142.0 identity=48.66 coverage=88.2172915072686)
seg (db=Seg db_id=seg from=329 to=341)
ACD18_27_8

Not on your lists

comp(9203..12649)
DNA (3447bp) protein (1149aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RPOB_MOOTA (db=UNIREF evalue=0.0 bit_score=1266.0 identity=56.67 coverage=91.644908616188)
DNA-directed RNA polymerase subunit beta
DNA-directed RNA polymerase subunit beta
seg (db=Seg db_id=seg from=1128 to=1143)
ACD18_27_9
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

13377..15884
DNA (2508bp) protein (836aa)
DNA translocase FtsK
DNA translocase FtsK
Cell divisionFtsK/SpoIIIE (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS46_9BACT (db=UNIREF evalue=4.0e-136 bit_score=489.0 identity=52.9 coverage=54.9043062200957)
seg (db=Seg db_id=seg from=137 to=155)
ACD18_27_10
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

15992..17488
DNA (1497bp) protein (499aa)
seg (db=Seg db_id=seg from=455 to=466)
coiled-coil (db=Coil db_id=coil from=71 to=92 evalue=NA)
coiled-coil 71..92 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
Displaying 10 items

View Taxonomy