ggKbase home page

GWB1_Spirochaetes_59_5_GWB1_scaffold_19165

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)
polysaccharide deacetylase Tax=GWB1_Spirochaetes_59_5_curated
Polysaccharide deacetylase id=3205393 bin=GWB1_Spirochaetes_59_5 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
polysaccharide deacetylase
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

377..871
DNA (495bp) protein (165aa)
Bacteriophage Mu tail sheath id=3205397 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
bacteriophage Mu tail sheath Tax=GWB1_Spirochaetes_59_5_curated
bacteriophage Mu tail sheath
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

913..1275
DNA (363bp) protein (121aa)
Putative uncharacterized protein id=3205401 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1276..1620
DNA (345bp) protein (115aa)
Mu-like prophage FluMu protein gp41 id=3205404 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Mu-like prophage FluMu protein gp41 Tax=GWB1_Spirochaetes_59_5_curated
Mu-like prophage FluMu protein gp41
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1763..3475
DNA (1713bp) protein (571aa)
phage tail tape measure protein, TP901 family Tax=GWB1_Spirochaetes_59_5_curated
Putative uncharacterized protein id=3205407 bin=GWB1_Spirochaetes_59_5 species=Methylophaga thiooxydans genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
phage tail tape measure protein, TP901 family
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4220..4651
DNA (432bp) protein (144aa)
DNA circulation family protein Tax=GWB1_Spirochaetes_59_5_curated
DNA circulation-like protein id=3205410 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DNA circulation family protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4644..5675
DNA (1032bp) protein (344aa)
Bacteriophage Mu P id=3205413 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
bacteriophage Mu P Tax=GWB1_Spirochaetes_59_5_curated
bacteriophage Mu P
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5669..6355
DNA (687bp) protein (229aa)
Phage baseplate assembly protein V id=3205416 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
phage baseplate assembly protein V Tax=GWB1_Spirochaetes_59_5_curated
phage baseplate assembly protein V
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6365..6832
DNA (468bp) protein (156aa)
GP46 family protein id=3205419 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GP46 family protein Tax=GWB1_Spirochaetes_59_5_curated
GP46 family protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6870..7925
DNA (1056bp) protein (352aa)
Baseplate J-like protein id=3205422 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
baseplate J-like protein Tax=GWB1_Spirochaetes_59_5_curated
baseplate J-like protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8370..8504
DNA (135bp) protein (45aa)
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
Tail protein, putative id=3205425 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8504..8953
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=3205427 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio sp. 6_1_46AFAA genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
tail fiber protein Tax=GWB1_Spirochaetes_59_5_curated
tail fiber protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9209..9769
DNA (561bp) protein (187aa)
Putative uncharacterized protein id=3205429 bin=GWB1_Spirochaetes_59_5 species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9793..10035
DNA (243bp) protein (81aa)
id=3205431 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
id=3205431 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10020..10169
DNA (150bp) protein (50aa)
id=3205432 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
id=3205432 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_16
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10157..10372
DNA (216bp) protein (72aa)
id=3205433 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
id=3205433 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_19165_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10388..11248
DNA (861bp) protein (287aa)
Collagen triple helix repeat protein id=3205530 bin=GWB1_Spirochaetes_59_5 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
collagen triple helix repeat protein Tax=GWB1_Spirochaetes_59_5_curated
collagen triple helix repeat protein
Displaying 17 items

View Taxonomy