ggKbase home page

GWB1_Spirochaetes_59_5_GWB1_scaffold_9872

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1..465)
DNA (465bp) protein (155aa)
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=GWB1_Spirochaetes_59_5_curated
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase 1 id=4103506 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Neisseria taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(476..1225)
DNA (750bp) protein (250aa)
Methyl-accepting chemotaxis sensory transducer id=4103508 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
methyl-accepting chemotaxis sensory transducer Tax=GWB1_Spirochaetes_59_5_curated
methyl-accepting chemotaxis sensory transducer
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2226..2717
DNA (492bp) protein (164aa)
Uncharacterized protein id=4103511 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2749..3387)
DNA (639bp) protein (213aa)
peptide methionine sulfoxide reductase msrB (EC:1.8.4.12) Tax=GWB1_Spirochaetes_59_5_curated
peptide methionine sulfoxide reductase msrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB id=4103513 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3492..4097)
DNA (606bp) protein (202aa)
Acyl-ACP thioesterase id=4103515 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
acyl-ACP thioesterase Tax=GWB1_Spirochaetes_59_5_curated
acyl-ACP thioesterase
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4346..6145
DNA (1800bp) protein (600aa)
signal transduction histidine kinase Tax=GWB1_Spirochaetes_59_5_curated
Signal transduction histidine kinase id=4103517 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
signal transduction histidine kinase
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6223..8001
DNA (1779bp) protein (593aa)
atoS; signal transduction histidine-protein kinase AtoS (EC:2.7.13.3); K07710 two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] Tax=GWB1_Spirochaetes_59_5_curated
PAS sensor protein id=4103519 bin=GWB1_Spirochaetes_59_5 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
multi-sensor signal transduction histidine kinase
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7998..9287
DNA (1290bp) protein (430aa)
Transcriptional regulatory protein id=4103521 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
two component Fis family sigma54-specific transcriptional regulator Tax=GWB1_Spirochaetes_59_5_curated
Fis family transcriptional regulator
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9523..10857
DNA (1335bp) protein (445aa)
AtoE id=4103523 bin=GWB1_Spirochaetes_59_5 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
atoE; protein AtoE; K02106 short-chain fatty acids transporter Tax=GWB1_Spirochaetes_59_5_curated
atoE; protein AtoE
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10989..11666
DNA (678bp) protein (226aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.9); K01034 acetate CoA-transferase alpha subunit [EC:2.8.3.8] Tax=GWB1_Spirochaetes_59_5_curated
3-oxoacid CoA-transferase subunit A (EC:2.8.3.9)
3-oxoacid CoA-transferase, A subunit id=4103525 bin=GWB1_Spirochaetes_59_5 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11677..12342
DNA (666bp) protein (222aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.9); K01035 acetate CoA-transferase beta subunit [EC:2.8.3.8] Tax=GWB1_Spirochaetes_59_5_curated
3-oxoacid CoA-transferase subunit B (EC:2.8.3.9)
Butyryl-CoA:acetoacetate CoA-transferase beta subunit id=4103529 bin=GWB1_Spirochaetes_59_5 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_9872_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12367..13413
DNA (1047bp) protein (349aa)
Thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWB1_Spirochaetes_59_5_curated
Thiolase id=4103534 bin=GWB1_Spirochaetes_59_5 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Thiolase
Displaying 12 items

View Taxonomy