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GWB1_Spirochaetes_59_5_GWB1_scaffold_1818

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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456..1742
DNA (1287bp) protein (429aa)
Alpha amylase catalytic region id=3164481 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
alpha amylase catalytic region Tax=GWB1_Spirochaetes_59_5_curated
alpha amylase catalytic region
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1791..2756
DNA (966bp) protein (322aa)
Radical SAM superfamily protein id=3164483 bin=GWB1_Spirochaetes_59_5 species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Radical SAM superfamily protein Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2753..3652)
DNA (900bp) protein (300aa)
signal transduction histidine kinase Tax=GWB1_Spirochaetes_59_5_curated
Signal transduction histidine kinase id=3164486 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
signal transduction histidine kinase
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3672..4397)
DNA (726bp) protein (242aa)
id=3164490 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
id=3164490 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4394..5536)
DNA (1143bp) protein (381aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family id=3164493 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWB1_Spirochaetes_59_5_curated
ABC transporter substrate-binding protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(5649..6365)
DNA (717bp) protein (239aa)
Regulatory protein LuxR id=3164498 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Regulatory protein LuxR Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6367..6936)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=3164503 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6989..7756)
DNA (768bp) protein (256aa)
ABC transporter, permease protein id=3164510 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=GWB1_Spirochaetes_59_5_curated
ABC transporter permease
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(7753..8592)
DNA (840bp) protein (280aa)
Nitrate transport ATP-binding protein NrtD id=3164517 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
nitrate transport ATP-binding protein NrtD; K02049 NitT/TauT family transport system ATP-binding protein Tax=GWB1_Spirochaetes_59_5_curated
nitrate transport ATP-binding protein NrtD
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(8586..9548)
DNA (963bp) protein (321aa)
Nlpa lipoprotein id=3164521 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
nlpa lipoprotein Tax=GWB1_Spirochaetes_59_5_curated
nlpa lipoprotein
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9684..15245)
DNA (5562bp) protein (1854aa)
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
Ig family protein id=3164619 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Ig family protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15249..17345)
DNA (2097bp) protein (699aa)
Tetratricopeptide repeat domain protein id=3164622 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17454..18038)
DNA (585bp) protein (195aa)
phenylacrylic acid decarboxylase (PAD) (EC:4.1.1.-); K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=GWB1_Spirochaetes_59_5_curated
phenylacrylic acid decarboxylase (PAD) (EC:4.1.1.-)
Phenylacrylic acid decarboxylase (PAD) id=3164624 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18048..18944)
DNA (897bp) protein (299aa)
putative 4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWB1_Spirochaetes_59_5_curated
Putative 4-hydroxybenzoate polyprenyltransferase id=3164626 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative 4-hydroxybenzoate polyprenyltransferase rbh
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18934..20394)
DNA (1461bp) protein (487aa)
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=GWB1_Spirochaetes_59_5_curated
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=3164629 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_16
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20461..21099)
DNA (639bp) protein (213aa)
Putative transcriptional regulator, Crp/Fnr family id=3164632 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative Crp/Fnr family transcriptional regulator Tax=GWB1_Spirochaetes_59_5_curated
putative Crp/Fnr family transcriptional regulator
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21164..21877
DNA (714bp) protein (238aa)
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
SNARE associated protein id=3164635 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_1818_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21846..23042)
DNA (1197bp) protein (399aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171); K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=GWB1_Spirochaetes_59_5_curated
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171)
rRNA (Guanine-N(2)-)-methyltransferase id=3164638 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Displaying 18 items

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