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GWB1_Spirochaetes_59_5_GWB1_scaffold_3919

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1..696
DNA (696bp) protein (232aa)
class IV aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21] Tax=GWB1_Spirochaetes_59_5_curated
Branched-chain amino acid aminotransferase (EC:2.6.1.42)
Aminotransferase class IV id=3692203 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(691..2286)
DNA (1596bp) protein (532aa)
histidine kinase (EC:2.7.13.3) Tax=GWB1_Spirochaetes_59_5_curated
histidine kinase (EC:2.7.13.3)
Histidine kinase id=3692205 bin=GWB1_Spirochaetes_59_5 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2663..3823
DNA (1161bp) protein (387aa)
Putative uncharacterized protein id=3692207 bin=GWB1_Spirochaetes_59_5 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
conserved membrane protein of unknown function
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3896..4267
DNA (372bp) protein (124aa)
Putative uncharacterized protein id=3692209 bin=GWB1_Spirochaetes_59_5 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
protein of unknown function DUF3870 Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4254..5342
DNA (1089bp) protein (363aa)
Mandelate racemase/muconate lactonizing protein id=3692211 bin=GWB1_Spirochaetes_59_5 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
mandelate racemase/muconate lactonizing protein Tax=GWB1_Spirochaetes_59_5_curated
mandelate racemase/muconate lactonizing protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5353..6837)
DNA (1485bp) protein (495aa)
pepD; aminoacyl-histidine dipeptidase; K01270 dipeptidase D [EC:3.4.13.-] Tax=GWB1_Spirochaetes_59_5_curated
Aminoacyl-histidine dipeptidase id=3692213 bin=GWB1_Spirochaetes_59_5 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
pepD; aminoacyl-histidine dipeptidase
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6933..8129)
DNA (1197bp) protein (399aa)
tryptophan synthase subunit beta; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=GWB1_Spirochaetes_59_5_curated
Tryptophan synthase beta chain id=3692215 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
tryptophan synthase subunit beta rbh
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8205..10637)
DNA (2433bp) protein (811aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=GWB1_Spirochaetes_59_5_curated
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=3692217 bin=GWB1_Spirochaetes_59_5 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
diguanylate cyclase
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10738..12186)
DNA (1449bp) protein (483aa)
id=3692219 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
id=3692219 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(12422..13909)
DNA (1488bp) protein (496aa)
60 kDa chaperonin id=3692220 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
chaperonin GroEL; K04077 chaperonin GroEL Tax=GWB1_Spirochaetes_59_5_curated
groEL; chaperone GroEL
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

14155..14868
DNA (714bp) protein (238aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] Tax=GWB1_Spirochaetes_59_5_curated
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase, RluA family id=3692222 bin=GWB1_Spirochaetes_59_5 species=Treponema sp. JC4 genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15008..15718
DNA (711bp) protein (237aa)
peptidylprolyl isomerase (EC:5.2.1.8); K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] Tax=GWB1_Spirochaetes_59_5_curated
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=3692224 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15789..16511)
DNA (723bp) protein (241aa)
Uncharacterized protein id=3692226 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16498..17922)
DNA (1425bp) protein (475aa)
Uncharacterized protein id=3692228 bin=GWB1_Spirochaetes_59_5 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
elongation domain-containing protein Tax=GWB1_Spirochaetes_59_5_curated
elongation domain-containing protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17962..18834
DNA (873bp) protein (291aa)
PHP domain protein id=3692230 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
PHP domain-containing protein; K07053 Tax=GWB1_Spirochaetes_59_5_curated
PHP domain-containing protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_16
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19028..19453)
DNA (426bp) protein (142aa)
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
Putative uncharacterized protein id=3692232 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19510..20190
DNA (681bp) protein (227aa)
ribosomal RNA small subunit methyltransferase I; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWB1_Spirochaetes_59_5_curated
Ribosomal RNA small subunit methyltransferase I id=3692234 bin=GWB1_Spirochaetes_59_5 species=Treponema saccharophilum genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ribosomal RNA small subunit methyltransferase I
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20243..20521
DNA (279bp) protein (93aa)
negative regulator of flagellin synthesis FlgM id=3692236 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein; K02398 negative regulator of flagellin synthesis FlgM Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_19
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20654..21802
DNA (1149bp) protein (383aa)
putative iron dependent alcohol dehydrogenase; K13954 alcohol dehydrogenase [EC:1.1.1.1] Tax=GWB1_Spirochaetes_59_5_curated
Putative iron dependent alcohol dehydrogenase id=3692238 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative iron dependent alcohol dehydrogenase
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_20
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22005..22823
DNA (819bp) protein (273aa)
TrmH family RNA methyltransferase Tax=GWB1_Spirochaetes_59_5_curated
tRNA/rRNA methyltransferase (SpoU) id=3692240 bin=GWB1_Spirochaetes_59_5 species=Treponema saccharophilum genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
TrmH family RNA methyltransferase
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_21
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22835..23026)
DNA (192bp) protein (64aa)
id=3692242 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
id=3692242 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_22
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

23186..24286
DNA (1101bp) protein (367aa)
multiple sugar-binding transport ATP-binding protein MsmK; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=GWB1_Spirochaetes_59_5_curated
Multiple sugar-binding transport ATP-binding protein MsmK id=3692243 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
multiple sugar-binding transport ATP-binding protein MsmK
GWB1_Spirochaetes_59_5_GWB1_scaffold_3919_23
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

24318..25889
DNA (1572bp) protein (524aa)
Uncharacterized protein id=3692245 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
Displaying 23 items

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