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GWB1_Spirochaetes_59_5_GWB1_scaffold_6292

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2..406
DNA (405bp) protein (135aa)
Major facilitator superfamily MFS_1 id=3887031 bin=GWB1_Spirochaetes_59_5 species=Coriobacterium glomerans genus=Coriobacterium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
major facilitator superfamily protein Tax=GWB1_Spirochaetes_59_5_curated
major facilitator superfamily protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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600..896
DNA (297bp) protein (99aa)
Predicted protein id=3887032 bin=GWB1_Spirochaetes_59_5 species=Candida tropicalis genus=Candida taxon_order=Saccharomycetales taxon_class=Saccharomycetes phylum=Ascomycota tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Predicted protein Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(969..1889)
DNA (921bp) protein (307aa)
Signal transduction histidine kinase id=3887033 bin=GWB1_Spirochaetes_59_5 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
signal transduction histidine kinase Tax=GWB1_Spirochaetes_59_5_curated
signal transduction histidine kinase
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1850..2332)
DNA (483bp) protein (161aa)
diguanylate cyclase Tax=GWB1_Spirochaetes_59_5_curated
Diguanylate cyclase (GGDEF) domain protein id=3887034 bin=GWB1_Spirochaetes_59_5 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
diguanylate cyclase
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2563..3450
DNA (888bp) protein (296aa)
ATPase-like, ParA/MinD id=3887035 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ATPase Tax=GWB1_Spirochaetes_59_5_curated
ATPase
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3461..4138
DNA (678bp) protein (226aa)
UPF0251 protein Spica_0683 id=3887036 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4153..7176)
DNA (3024bp) protein (1008aa)
sensory transduction histidine kinase Tax=GWB1_Spirochaetes_59_5_curated
Sensory transduction histidine kinase id=3887037 bin=GWB1_Spirochaetes_59_5 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
sensory transduction histidine kinase
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_trna_1
unknown

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comp(7479..7560)
DNA (82bp)
transferRNA
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7628..8104)
DNA (477bp) protein (159aa)
PTS system, fructose-specific IIABC component (EC:2.7.1.69)
putative PTS IIA-like nitrogen-regulatory protein PtsN Tax=GWB1_Spirochaetes_59_5_curated
Putative PTS IIA-like nitrogen-regulatory protein PtsN id=3887038 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8106..8453)
DNA (348bp) protein (116aa)
Putative uncharacterized protein id=3887048 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8514..9065)
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=3887055 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(9055..10530)
DNA (1476bp) protein (492aa)
adenylate/guanylate cyclase Tax=GWB1_Spirochaetes_59_5_curated
Adenylate/guanylate cyclase id=3887061 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
adenylate/guanylate cyclase
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10586..11362)
DNA (777bp) protein (259aa)
Ser/Thr protein phosphatase family protein id=3887067 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Ser/Thr protein phosphatase family protein; K09769 hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
Ser/Thr protein phosphatase family protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11483..13009)
DNA (1527bp) protein (509aa)
Ribonuclease Y id=3887069 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
2,3 cyclic-nucleotide 2-phosphodiesterase; K06950 uncharacterized protein Tax=GWB1_Spirochaetes_59_5_curated
2,3 cyclic-nucleotide 2-phosphodiesterase
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13249..13524
DNA (276bp) protein (92aa)
RRM domain-containing RNA-binding protein id=3887071 bin=GWB1_Spirochaetes_59_5 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
RRM domain-containing RNA-binding protein Tax=GWB1_Spirochaetes_59_5_curated
RRM domain-containing RNA-binding protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13521..14471)
DNA (951bp) protein (317aa)
rluD_1; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWB1_Spirochaetes_59_5_curated
Pseudouridine synthase id=3887074 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
rluD_1; ribosomal large subunit pseudouridine synthase D
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_16
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

14577..15374
DNA (798bp) protein (266aa)
Putative uncharacterized protein id=3887076 bin=GWB1_Spirochaetes_59_5 species=Pyrococcus yayanosii genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Putative uncharacterized protein Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15377..16273
DNA (897bp) protein (299aa)
MscS Mechanosensitive ion channel id=3887081 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
mechanosensitive ion channel MscS Tax=GWB1_Spirochaetes_59_5_curated
mechanosensitive ion channel MscS
GWB1_Spirochaetes_59_5_GWB1_scaffold_6292_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16339..16491
DNA (153bp) protein (51aa)
Cyclic nucleotide-binding protein id=3887082 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Cyclic nucleotide-binding protein Tax=GWB1_Spirochaetes_59_5_curated
Displaying 19 items

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