ggKbase home page

GWB1_Spirochaetales_60_80_GWB1_scaffold_1030

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_1
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(8..130)
DNA (123bp) protein (41aa)
id=2503951 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
id=2503951 Tax=GWB1_Spirochaetes_60_80_curated
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_2
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(232..972)
DNA (741bp) protein (247aa)
Flagellar filament outer layer protein FlaA id=2503952 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
flagellar filament outer layer protein FlaA Tax=GWB1_Spirochaetes_60_80_curated
flagellar filament outer layer protein FlaA
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_3
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(989..1771)
DNA (783bp) protein (261aa)
Flagellar filament outer layer protein FlaA id=2503955 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
flagellar filament outer layer protein FlaA Tax=GWB1_Spirochaetes_60_80_curated
flagellar filament outer layer protein FlaA
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_4
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(1880..2815)
DNA (936bp) protein (312aa)
id=2503957 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
id=2503957 Tax=GWB1_Spirochaetes_60_80_curated
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_5
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

3154..4152
DNA (999bp) protein (333aa)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=GWB1_Spirochaetes_60_80_curated
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II id=2503958 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_6
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(4279..4749)
DNA (471bp) protein (157aa)
Ribonuclease H (EC:1.3.1.20 3.1.26.4) Tax=GWB1_Spirochaetes_60_80_curated
Ribonuclease H (EC:1.3.1.20 3.1.26.4)
Ribonuclease H id=2503962 bin=GWF1_Spirochaetes_60_12 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_7
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(4746..6704)
DNA (1959bp) protein (653aa)
TRAP dicarboxylate transporter subunit DctM Tax=GWB1_Spirochaetes_60_80_curated
Trap dicarboxylate transporter, dctm subunit id=2517727 bin=GWB1_Spirochaetales_60_80 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
TRAP dicarboxylate transporter subunit DctM
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_8
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(6704..7714)
DNA (1011bp) protein (337aa)
putative TRAP dicarboxylate transporter subunit DctP id=2503967 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
putative TRAP dicarboxylate transporter subunit DctP Tax=GWB1_Spirochaetes_60_80_curated
putative TRAP dicarboxylate transporter subunit DctP
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_9
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(7716..8669)
DNA (954bp) protein (318aa)
putative lipoprotein id=2503969 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
putative lipoprotein Tax=GWB1_Spirochaetes_60_80_curated
putative lipoprotein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_10
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

8717..10636
DNA (1920bp) protein (640aa)
ABC-type multidrug transport system, ATPase and permease components Tax=GWB1_Spirochaetes_60_80_curated
ABC transporter related protein id=2503971 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
ABC-type multidrug transport system, ATPase and permease components
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_11
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

10639..12777
DNA (2139bp) protein (713aa)
multidrug ABC transporter ATPase id=2503973 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
multidrug ABC transporter ATPase Tax=GWB1_Spirochaetes_60_80_curated
multidrug ABC transporter ATPase
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_12
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

12777..14147
DNA (1371bp) protein (457aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2503975 bin=GWF1_Spirochaetes_60_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Fis family two component sigma-54 specific transcriptional regulator Tax=GWB1_Spirochaetes_60_80_curated
Fis family two component sigma-54 specific transcriptional regulator
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_13
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(14229..14795)
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=2503977 bin=GWF1_Spirochaetes_60_12 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_14
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(14966..16081)
DNA (1116bp) protein (372aa)
Peptidase M29 aminopeptidase II id=2517876 bin=GWB1_Spirochaetales_60_80 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
peptidase M29 aminopeptidase II Tax=GWB1_Spirochaetes_60_80_curated
peptidase M29 aminopeptidase II
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_15
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

16189..17208
DNA (1020bp) protein (340aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) Tax=GWB1_Spirochaetes_60_80_curated
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Ribosomal large subunit pseudouridine synthase D id=2517882 bin=GWB1_Spirochaetales_60_80 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_16
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

17397..19205
DNA (1809bp) protein (603aa)
hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
Putative uncharacterized protein id=2503985 bin=GWF1_Spirochaetes_60_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_17
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

19202..19984
DNA (783bp) protein (261aa)
Putative uncharacterized protein id=2503987 bin=GWF1_Spirochaetes_60_12 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein; K05810 conserved hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_18
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

19981..21309
DNA (1329bp) protein (443aa)
OmpA family protein id=2503990 bin=GWF1_Spirochaetes_60_12 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
OmpA/MotB domain-containing protein Tax=GWB1_Spirochaetes_60_80_curated
outer membrane protein/peptidoglycan-associated (lipo)protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_19
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

21313..21948
DNA (636bp) protein (212aa)
id=2503993 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
id=2503993 Tax=GWB1_Spirochaetes_60_80_curated
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_20
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

21945..23666
DNA (1722bp) protein (574aa)
hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
Uncharacterized protein id=2503994 bin=GWF1_Spirochaetes_60_12 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_21
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

23666..25138
DNA (1473bp) protein (491aa)
Radical SAM domain protein id=2517909 bin=GWB1_Spirochaetales_60_80 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
radical SAM domain protein Tax=GWB1_Spirochaetes_60_80_curated
radical SAM domain protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_22
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

25135..26028
DNA (894bp) protein (298aa)
id=2504005 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
id=2504005 Tax=GWB1_Spirochaetes_60_80_curated
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_23
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(26134..26367)
DNA (234bp) protein (78aa)
id=2504007 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
id=2504007 Tax=GWB1_Spirochaetes_60_80_curated
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_24
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

27256..28221
DNA (966bp) protein (322aa)
Putative transcriptional regulator id=2504009 bin=GWF1_Spirochaetes_60_12 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
putative transcriptional regulator Tax=GWB1_Spirochaetes_60_80_curated
putative transcriptional regulator
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_25
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

28279..28878
DNA (600bp) protein (200aa)
hypothetical protein FbacS_10482 id=2504089 bin=GWF1_Spirochaetes_60_12 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
hypothetical protein Tax=GWB1_Spirochaetes_60_80_curated
hypothetical protein
GWB1_Spirochaetales_60_80_GWB1_scaffold_1030_26
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

29069..30085
DNA (1017bp) protein (339aa)
ATP-dependent RNA helicase id=2504090 bin=GWF1_Spirochaetes_60_12 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
ATP-dependent RNA helicase; K07012 Tax=GWB1_Spirochaetes_60_80_curated
ATP-dependent RNA helicase
Displaying 26 items

View Taxonomy