ggKbase home page

GWF1_Sphingobium_63_6_gwf1_scaffold_5423

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..758)
DNA (756bp) protein (252aa)
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=GWF1_Sphingomonadales_63_6_curated
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Sphingobium xenophagum RepID=UPI00037C1947
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(823..1149)
DNA (327bp) protein (109aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EXT6_SPHCR
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=GWF1_Sphingomonadales_63_6_curated
excinuclease ABC C subunit domain-containing protein
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1251..1865)
DNA (615bp) protein (205aa)
amino acid transporter n=1 Tax=Sphingobium xenophagum RepID=UPI0002E65780
LysE-family transporter Tax=GWF1_Sphingomonadales_63_6_curated
LysE-family transporter
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2081..2443)
DNA (363bp) protein (121aa)
50S ribosomal protein L20 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHX8_9SPHN
rplT; ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=GWF1_Sphingomonadales_63_6_curated
rplT; ribosomal protein L20
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2457..2660)
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=4 Tax=Sphingobium RepID=F6EXT4_SPHCR
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3728..3892)
DNA (165bp) protein (55aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3914..4150)
DNA (237bp) protein (79aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_8
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4214..4675)
DNA (462bp) protein (154aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_9
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5089..5904
DNA (816bp) protein (272aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_10
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6309..7247)
DNA (939bp) protein (313aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10); K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] Tax=GWF1_Sphingomonadales_63_6_curated
Cobalamin biosynthesis protein CobD n=1 Tax=Sphingobium baderi LL03 RepID=T0HWH1_9SPHN
cobD; Cobalamin biosynthesis protein CobD
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_11
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7240..8214)
DNA (975bp) protein (325aa)
aminotransferase (EC:2.6.1.-); K02225 cobalamin biosynthetic protein CobC Tax=GWF1_Sphingomonadales_63_6_curated
UPI0003D5FAB8 related cluster n=1 Tax=unknown RepID=UPI0003D5FAB8
aminotransferase, class I and II
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_12
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8211..8354)
DNA (144bp) protein (48aa)
cobalamin synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=GWF1_Sphingomonadales_63_6_curated
Cobalamin synthase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D7Y1_SPHYA
cobalamin synthase
GWF1_Sphingobium_63_6_gwf1_scaffold_5423_13
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8603..8785
DNA (183bp) protein (61aa)
Tax=GWF1_Sphingomonadales_63_6_curated
Displaying 13 items

View Taxonomy