ggKbase home page

GWF2_Lentisphaerae_57_35_gwf2_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3..7490)
DNA (7488bp) protein (2496aa)
beta-glycosidase-like protein Tax=GWF2_Lentisphaerae_57_35_curated
CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein id=3333688 bin=GWF2_Lentisphaerae_57_35 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
beta-glycosidase-like protein rbh
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

7871..9394
DNA (1524bp) protein (508aa)
Cytidyltransferase-related domain protein id=4098298 bin=GWF2_Lentisphaerae_57_35 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Cytidyltransferase-related domain protein Tax=GWF2_Lentisphaerae_57_35_curated
Cytidyltransferase-related domain protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

9405..10370
DNA (966bp) protein (322aa)
Putative uncharacterized protein id=4098299 bin=GWF2_Lentisphaerae_57_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

10374..11528
DNA (1155bp) protein (385aa)
Putative uncharacterized protein id=4098300 bin=GWF2_Lentisphaerae_57_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_5
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

11572..12651
DNA (1080bp) protein (360aa)
Putative uncharacterized protein id=4098369 bin=GWF2_Lentisphaerae_57_35 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(12677..15229)
DNA (2553bp) protein (851aa)
id=4098371 Tax=GWF2_Lentisphaerae_57_35_curated
id=4098371 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_7
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15302..16108)
DNA (807bp) protein (269aa)
Putative uncharacterized protein id=4098372 bin=GWF2_Lentisphaerae_57_35 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_8
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16102..17088)
DNA (987bp) protein (329aa)
Putative uncharacterized protein id=4098374 bin=GWF2_Lentisphaerae_57_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_9
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17265..19373)
DNA (2109bp) protein (703aa)
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
Putative uncharacterized protein id=4098376 bin=GWF2_Lentisphaerae_57_35 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
conserved exported protein of unknown function
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_trna_1
unknown

Not on your lists

comp(19564..19637)
DNA (74bp)
transferRNA
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_10
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

19820..22060
DNA (2241bp) protein (747aa)
id=4098379 Tax=GWF2_Lentisphaerae_57_35_curated
id=4098379 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

22332..23375
DNA (1044bp) protein (348aa)
hydroxymethylglutaryl-CoA reductase (NADPH) (EC:1.1.1.34); K00021 hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] Tax=GWF2_Lentisphaerae_57_35_curated
hydroxymethylglutaryl-CoA reductase (NADPH) (EC:1.1.1.34)
Hydroxymethylglutaryl-CoA reductase (NADPH) id=4098380 bin=GWF2_Lentisphaerae_57_35 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_12
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

23469..24512
DNA (1044bp) protein (348aa)
isopentenyl pyrophosphate isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=GWF2_Lentisphaerae_57_35_curated
isopentenyl pyrophosphate isomerase (EC:5.3.3.2)
isopentenyl pyrophosphate isomerase id=4098382 bin=GWF2_Lentisphaerae_57_35 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_13
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

24939..26111
DNA (1173bp) protein (391aa)
hydroxymethylglutaryl-coenzyme A synthase (EC:2.3.3.10); K01641 hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] Tax=GWF2_Lentisphaerae_57_35_curated
hydroxymethylglutaryl-coenzyme A synthase (EC:2.3.3.10)
hydroxymethylglutaryl-CoA synthase id=4098385 bin=GWF2_Lentisphaerae_57_35 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_14
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

26341..27345
DNA (1005bp) protein (335aa)
putative phopshomevalonate kinase; K00869 mevalonate kinase [EC:2.7.1.36] Tax=GWF2_Lentisphaerae_57_35_curated
mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase id=4098387 bin=GWF2_Lentisphaerae_57_35 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_15
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

27503..28390
DNA (888bp) protein (296aa)
mvk; mevalonate kinase (EC:2.7.1.36); K00869 mevalonate kinase [EC:2.7.1.36] Tax=GWF2_Lentisphaerae_57_35_curated
mvk; phosphomevalonate kinase (EC:2.7.4.2)
mevalonate kinase id=4098389 bin=GWF2_Lentisphaerae_57_35 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_16
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

28964..29530
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=4098392 bin=GWF2_Lentisphaerae_57_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_17
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(29542..30651)
DNA (1110bp) protein (370aa)
trmU_2; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61) Tax=GWF2_Lentisphaerae_57_35_curated
trmU_2; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA id=4098394 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_18
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(30725..31870)
DNA (1146bp) protein (382aa)
cystathionine gamma-synthase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48] Tax=GWF2_Lentisphaerae_57_35_curated
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase id=4098396 bin=GWF2_Lentisphaerae_57_35 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_19
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(31860..33257)
DNA (1398bp) protein (466aa)
cystathionine beta-synthase (EC:4.2.1.22) Tax=GWF2_Lentisphaerae_57_35_curated
cystathionine beta-synthase (EC:4.2.1.22)
Cystathionine beta-synthase id=4098398 bin=GWF2_Lentisphaerae_57_35 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_20
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(33349..34644)
DNA (1296bp) protein (432aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] Tax=GWF2_Lentisphaerae_57_35_curated
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase id=4098400 bin=GWF2_Lentisphaerae_57_35 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_21
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(34854..35258)
DNA (405bp) protein (135aa)
Rrf2 family protein id=4098401 bin=GWF2_Lentisphaerae_57_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
rrf2 family protein Tax=GWF2_Lentisphaerae_57_35_curated
rrf2 family protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_22
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

35421..36446
DNA (1026bp) protein (342aa)
hypothetical protein; K01012 biotin synthetase [EC:2.8.1.6] Tax=GWF2_Lentisphaerae_57_35_curated
Putative uncharacterized protein id=4098402 bin=GWF2_Lentisphaerae_57_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_23
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(36988..37947)
DNA (960bp) protein (320aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] Tax=GWF2_Lentisphaerae_57_35_curated
Cysteine synthase id=4098403 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
cysteine synthase
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_24
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(37980..38429)
DNA (450bp) protein (150aa)
Putative Rrf2 family DNA binding protein id=4098404 bin=GWF2_Lentisphaerae_57_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Rrf2 family DNA binding protein Tax=GWF2_Lentisphaerae_57_35_curated
Rrf2 family DNA binding protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_25
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(38671..39417)
DNA (747bp) protein (249aa)
UBA/THIF-type NAD/FAD binding protein id=4098405 bin=GWF2_Lentisphaerae_57_35 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
UBA/THIF-type NAD/FAD binding protein Tax=GWF2_Lentisphaerae_57_35_curated
UBA/THIF-type NAD/FAD binding protein
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_26
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(39408..40481)
DNA (1074bp) protein (358aa)
Tyrosine lyase ThiH id=4098406 bin=GWF2_Lentisphaerae_57_35 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
thiH; thiamine biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH Tax=GWF2_Lentisphaerae_57_35_curated
thiH; thiamine biosynthesis protein ThiH
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_27
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(40478..41248)
DNA (771bp) protein (257aa)
Thiazole synthase id=4098407 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=GWF2_Lentisphaerae_57_35_curated
thiG; thiazole synthase
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_28
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(41253..41453)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS id=4098408 bin=GWF2_Lentisphaerae_57_35 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein Tax=GWF2_Lentisphaerae_57_35_curated
thiamine biosynthesis protein ThiS
GWF2_Lentisphaerae_57_35_gwf2_scaffold_358_29
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(41750..44011)
DNA (2262bp) protein (754aa)
Endoglucanase Tax=GWF2_Lentisphaerae_57_35_curated
Glycoside hydrolase family 5 id=4098458 bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Endoglucanase
Displaying items 1-30 of 58 in total

View Taxonomy