ggKbase home page

GWF2_OP3_43_52_gwf2_scaffold_2028

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_OP3_43_52_gwf2_scaffold_2028_1
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

3..119
DNA (117bp) protein (39aa)
Putative uncharacterized protein id=3706661 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Putative uncharacterized protein Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_2028_2
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

579..3188
DNA (2610bp) protein (870aa)
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
hypothetical protein B1040_16884 id=4399617 bin=GWA2_Planctomycetia_40_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_2028_3
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

3720..14558
DNA (10839bp) protein (3613aa)
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
Putative uncharacterized protein id=3706731 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_2028_4
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

14699..20347
DNA (5649bp) protein (1883aa)
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
Putative uncharacterized protein id=3599044 bin=GWC2_OP3_44_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
GWF2_OP3_43_52_gwf2_scaffold_2028_5
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

20437..21726
DNA (1290bp) protein (430aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=GWF2_WOR_2_43_52_curated
Dihydrolipoyl dehydrogenase id=3598883 bin=GWC2_OP3_44_8 species=Helcococcus kunzii genus=Helcococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
dihydrolipoamide dehydrogenase
GWF2_OP3_43_52_gwf2_scaffold_2028_6
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

21729..22427
DNA (699bp) protein (233aa)
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=GWF2_WOR_2_43_52_curated
Octanoyltransferase id=3598880 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
GWF2_OP3_43_52_gwf2_scaffold_2028_7
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

22420..22659
DNA (240bp) protein (80aa)
branched-chain alpha-keto acid dehydrogenase subunit E2; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=GWF2_WOR_2_43_52_curated
Putative uncharacterized protein id=3706741 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
catalytic domain of components of various dehydrogenase complexes
GWF2_OP3_43_52_gwf2_scaffold_2028_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

22670..23572
DNA (903bp) protein (301aa)
hypothetical protein LinasL1_02220 id=3706743 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein LinasL1_02220 Tax=GWF2_WOR_2_43_52_curated
GWF2_OP3_43_52_gwf2_scaffold_2028_9
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

23684..23983
DNA (300bp) protein (100aa)
DNA polymerase beta domain protein region id=3706745 bin=GWF2_OP3_43_52 species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
nucleotidyltransferase
GWF2_OP3_43_52_gwf2_scaffold_2028_10
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

23970..24302
DNA (333bp) protein (111aa)
Nucleotidyltransferase, putative id=3706747 bin=GWF2_OP3_43_52 species=Thermococcus gammatolerans genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Nucleotidyltransferase Tax=GWF2_WOR_2_43_52_curated
Nucleotidyltransferase
GWF2_OP3_43_52_gwf2_scaffold_2028_11
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

24787..25026
DNA (240bp) protein (80aa)
Excisionase/Xis, DNA-binding protein id=3706749 bin=GWF2_OP3_43_52 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
excisionase/Xis, DNA-binding Tax=GWF2_WOR_2_43_52_curated
excisionase
GWF2_OP3_43_52_gwf2_scaffold_2028_12
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

25037..25468
DNA (432bp) protein (144aa)
DNA polymerase, beta domain protein region id=3706751 bin=GWF2_OP3_43_52 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA polymerase subunit beta Tax=GWF2_WOR_2_43_52_curated
DNA polymerase subunit beta
GWF2_OP3_43_52_gwf2_scaffold_2028_13
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

25462..25818
DNA (357bp) protein (119aa)
DNA polymerase beta domain protein region id=3706753 bin=GWF2_OP3_43_52 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DNA polymerase beta domain-containing protein region Tax=GWF2_WOR_2_43_52_curated
DNA polymerase beta domain-containing protein region
GWF2_OP3_43_52_gwf2_scaffold_2028_14
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

25802..26221
DNA (420bp) protein (140aa)
HEPN domain protein id=3706754 bin=GWF2_OP3_43_52 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
HEPN domain-containing protein Tax=GWF2_WOR_2_43_52_curated
HEPN domain-containing protein
GWF2_OP3_43_52_gwf2_scaffold_2028_15
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

26419..26856
DNA (438bp) protein (146aa)
Cyclase/dehydrase, putative id=3706755 bin=GWF2_OP3_43_52 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cyclase/dehydrase Tax=GWF2_WOR_2_43_52_curated
cyclase/dehydrase
GWF2_OP3_43_52_gwf2_scaffold_2028_16
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

26849..27934
DNA (1086bp) protein (362aa)
Shikimate/quinate 5-dehydrogenase id=3706756 bin=GWF2_OP3_43_52 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
shikimate/quinate 5-dehydrogenase Tax=GWF2_WOR_2_43_52_curated
shikimate/quinate 5-dehydrogenase
GWF2_OP3_43_52_gwf2_scaffold_2028_17
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

27936..30104
DNA (2169bp) protein (723aa)
signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWF2_WOR_2_43_52_curated
Signal transduction histidine kinase id=3706758 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
signal transduction histidine kinase
GWF2_OP3_43_52_gwf2_scaffold_2028_18
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

30119..30481
DNA (363bp) protein (121aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=3706760 bin=GWF2_OP3_43_52 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Fis family transcriptional regulator Tax=GWF2_WOR_2_43_52_curated
Fis family transcriptional regulator
GWF2_OP3_43_52_gwf2_scaffold_2028_19
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

30517..32823
DNA (2307bp) protein (769aa)
Diguanylate cyclase id=3706762 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
diguanylate cyclase Tax=GWF2_WOR_2_43_52_curated
diguanylate cyclase
GWF2_OP3_43_52_gwf2_scaffold_2028_20
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

32850..34037
DNA (1188bp) protein (396aa)
Hamp domain/gaf domain/hd domain protein id=3706764 bin=GWF2_OP3_43_52 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hamp domain/gaf domain/hd domain protein Tax=GWF2_WOR_2_43_52_curated
hamp domain/gaf domain/hd domain-containing protein
GWF2_OP3_43_52_gwf2_scaffold_2028_21
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

34191..35351
DNA (1161bp) protein (387aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Tax=GWF2_WOR_2_43_52_curated
Diacylglycerol glucosyltransferase id=3706766 bin=GWF2_OP3_43_52 species=uncultured bacterium CSLF42 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
GWF2_OP3_43_52_gwf2_scaffold_2028_22
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

35367..36221
DNA (855bp) protein (285aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=GWF2_WOR_2_43_52_curated
Similar to lipid A biosynthesis lauroyl acyltransferase id=3706768 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
lipid A biosynthesis acyltransferase
GWF2_OP3_43_52_gwf2_scaffold_2028_23
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

36238..36915
DNA (678bp) protein (226aa)
Glycosyl transferase family 2 id=3706770 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
glycosyl transferase Tax=GWF2_WOR_2_43_52_curated
glycosyl transferase family 2
GWF2_OP3_43_52_gwf2_scaffold_2028_24
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

37184..38893
DNA (1710bp) protein (570aa)
General secretion pathway protein E (Type II traffic warden ATPase) Tax=GWF2_WOR_2_43_52_curated
Putative General secretion pathway protein E (Type II traffic warden ATPase) id=3690255 bin=GWC2_OP3_44_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
General secretion pathway protein E (Type II traffic warden ATPase)
GWF2_OP3_43_52_gwf2_scaffold_2028_25
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

38900..40105
DNA (1206bp) protein (402aa)
General secretion pathway protein F id=3706818 bin=GWF2_OP3_43_52 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
gspF2; protein GspF2; K02455 general secretion pathway protein F Tax=GWF2_WOR_2_43_52_curated
gspF2; protein GspF2
GWF2_OP3_43_52_gwf2_scaffold_2028_26
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

40220..40681
DNA (462bp) protein (154aa)
Outer membrane secretion protein T id=3706820 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
xcpT; type II secretion system protein XcpT Tax=GWF2_WOR_2_43_52_curated
xcpT; type II secretion system protein XcpT
GWF2_OP3_43_52_gwf2_scaffold_2028_27
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

40656..41201
DNA (546bp) protein (182aa)
Putative uncharacterized protein Tax=GWF2_WOR_2_43_52_curated
Putative uncharacterized protein id=3706826 bin=GWF2_OP3_43_52 species=uncultured verrucomicrobium HF0070_15G23 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_2028_28
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

41188..41547
DNA (360bp) protein (120aa)
id=3706829 Tax=GWF2_WOR_2_43_52_curated
id=3706829 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_2028_29
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

41584..42264
DNA (681bp) protein (227aa)
id=3706830 Tax=GWF2_WOR_2_43_52_curated
id=3706830 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWF2_OP3_43_52_gwf2_scaffold_2028_30
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

42281..43300
DNA (1020bp) protein (340aa)
general secretion pathway protein K Tax=GWF2_WOR_2_43_52_curated
General secretion pathway protein K id=3706831 bin=GWF2_OP3_43_52 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Displaying items 1-30 of 49 in total

View Taxonomy