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GWF2_RBX1_38_17_gwf2_scaffold_3485

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_3485_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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265..495
DNA (231bp) protein (77aa)
id=2073542 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2073542 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3485_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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531..866
DNA (336bp) protein (112aa)
id=2073541 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2073541 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3485_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1017..2117)
DNA (1101bp) protein (367aa)
Uncharacterized protein id=2073539 bin=GWD2_RBX1-related_39_127 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_3485_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2604..3371
DNA (768bp) protein (256aa)
Dihydrodipicolinate reductase (EC:1.17.1.8)
Dihydrodipicolinate reductase id=4080675 bin=GWF2_OP9-related_38_17 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3485_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3587..5827)
DNA (2241bp) protein (747aa)
id=24609819 Tax=GWF2_RBX1_38_17_curated
id=24609819 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWF2_RBX1_38_17_gwf2_scaffold_3485_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(5828..6709)
DNA (882bp) protein (294aa)
id=4080677 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=4080677 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3485_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(6804..7775)
DNA (972bp) protein (324aa)
aminoglycoside phosphotransferase id=24609817 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
aminoglycoside phosphotransferase Tax=GWF2_RBX1_38_17_curated
aminoglycoside phosphotransferase
GWF2_RBX1_38_17_gwf2_scaffold_3485_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(7780..9474)
DNA (1695bp) protein (565aa)
DNA repair protein RecN id=4080679 bin=GWF2_OP9-related_38_17 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=GWF2_RBX1_38_17_curated
DNA repair protein RecN
GWF2_RBX1_38_17_gwf2_scaffold_3485_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9474..10310)
DNA (837bp) protein (279aa)
inorganic polyphosphate/ATP-NAD kinase; K00858 NAD+ kinase [EC:2.7.1.23] Tax=GWF2_RBX1_38_17_curated
Probable inorganic polyphosphate/ATP-NAD kinase id=4080680 bin=GWF2_OP9-related_38_17 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
inorganic polyphosphate/ATP-NAD kinase
GWF2_RBX1_38_17_gwf2_scaffold_3485_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(10307..10930)
DNA (624bp) protein (208aa)
Putative uncharacterized protein id=2095215 bin=GWE2_RBX1_39_32 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_3485_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(10965..11429)
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=2095213 bin=GWE2_RBX1_39_32 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_3485_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11504..12313)
DNA (810bp) protein (270aa)
hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] Tax=GWF2_RBX1_38_17_curated
Hemolysin A id=2095211 bin=GWE2_RBX1_39_32 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hemolysin A
GWF2_RBX1_38_17_gwf2_scaffold_3485_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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12658..13593
DNA (936bp) protein (312aa)
beta-mannanase id=24609811 bin=RAAC11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC11 organism_group=Unknown_CP
beta-mannanase Tax=GWF2_RBX1_38_17_curated
beta-mannanase
GWF2_RBX1_38_17_gwf2_scaffold_3485_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13738..14589
DNA (852bp) protein (284aa)
Putative uncharacterized protein id=2095207 bin=GWE2_RBX1_39_32 species=Johnsonella ignava genus=Johnsonella taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
yycJ; metaLLo-hydrolase yycJ Tax=GWF2_RBX1_38_17_curated
yycJ; metaLLo-hydrolase yycJ
GWF2_RBX1_38_17_gwf2_scaffold_3485_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14600..15106)
DNA (507bp) protein (169aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=GWF2_RBX1_38_17_curated
Methylated-DNA--protein-cysteine methyltransferase id=2073509 bin=GWD2_RBX1-related_39_127 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methylated-DNA--protein-cysteine methyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_3485_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(15121..16698)
DNA (1578bp) protein (526aa)
Uncharacterized protein id=4080697 bin=GWF2_OP9-related_38_17 species=Halanaerobium saccharolyticum genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Copper amine oxidase-like domain-containing protein Tax=GWF2_RBX1_38_17_curated
copper amine oxidase-like domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_3485_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(16910..19333)
DNA (2424bp) protein (808aa)
Peptidase S16 lon domain protein id=4080700 bin=GWF2_OP9-related_38_17 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
peptidase S16 lon domain-containing protein Tax=GWF2_RBX1_38_17_curated
peptidase S16 lon domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_3485_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19567..20433)
DNA (867bp) protein (289aa)
(50S ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-) Tax=GWF2_RBX1_38_17_curated
(50S ribosomal protein L11P)-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase id=4080703 bin=GWF2_OP9-related_38_17 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_3485_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20690..20980)
DNA (291bp) protein (97aa)
acetolactate synthase, small subunit (EC:2.2.1.6) Tax=GWF2_RBX1_38_17_curated
acetolactate synthase, small subunit (EC:2.2.1.6)
Amino acid-binding ACT domain protein id=2095169 bin=GWE2_RBX1_39_32 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_3485_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20970..22646)
DNA (1677bp) protein (559aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWF2_RBX1_38_17_curated
ilvB2; acetolactate synthase isozyme 1 large subunit (EC:2.2.1.6) rbh
Acetolactate synthase id=4080707 bin=GWF2_OP9-related_38_17 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Displaying 20 items

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