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RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_1
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
Methyltransferase type 11 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGK9_DESAR
methyltransferase type 11 Tax=RBG_13_Deltaproteobacteria_58_19_curated
methyltransferase type 11
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_2
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269..772)
DNA (504bp) protein (168aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
Putative integral membrane protein id=2283978 bin=GWB2_Nitrospirae_rel_47_37 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_3
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(869..985)
DNA (117bp) protein (39aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_4
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1051..1236)
DNA (186bp) protein (62aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_5
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1318..1719)
DNA (402bp) protein (134aa)
ArsR family transcriptional regulator Tax=RBG_13_Deltaproteobacteria_58_19_curated
Transcriptional regulator, ArsR family id=4794076 bin=GWC2_Syntrophobacterales_56_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
ArsR family transcriptional regulator
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_6
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1836..2525)
DNA (690bp) protein (230aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02003 putative ABC transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIT1_DESAR
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_7
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2525..3724)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIT0_DESAR
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_8
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3724..4881)
DNA (1158bp) protein (386aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIS9_DESAR
RND family efflux transporter MFP subunit Tax=RBG_13_Deltaproteobacteria_58_19_curated
RND family efflux transporter MFP subunit
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_9
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4881..6284)
DNA (1404bp) protein (468aa)
Outer membrane efflux protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIS8_DESAR
outer membrane efflux protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
outer membrane efflux protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_10
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6266..6604)
DNA (339bp) protein (113aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
Uncharacterized protein id=3223396 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_11
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7217..8128
DNA (912bp) protein (304aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_12
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8567..8686
DNA (120bp) protein (40aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_13
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8914..9396)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC96_DESAR
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_14
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9591..9956)
DNA (366bp) protein (122aa)
nitrogen regulatory protein P-II Tax=RBG_13_Deltaproteobacteria_58_19_curated
Nitrogen regulatory protein P-II id=3792534 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
nitrogen regulatory protein P-II
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_15
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9967..13074)
DNA (3108bp) protein (1036aa)
czcA; cation efflux system protein CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA Tax=RBG_13_Deltaproteobacteria_58_19_curated
Heavy metal efflux pump, CzcA family id=2127726 bin=GWB2_CP_45_9 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
czcA; cation efflux system protein CzcA
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_16
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13077..14315)
DNA (1239bp) protein (413aa)
Heavy metal efflux pump, CzcB family protein; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=RBG_13_Deltaproteobacteria_58_19_curated
Efflux transporter, RND family, MFP subunit id=1778312 bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
secretion protein HlyD
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_17
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14312..15550)
DNA (1239bp) protein (413aa)
putative heavy metal efflux system, outer membrane lipoprotein Tax=RBG_13_Deltaproteobacteria_58_19_curated
Putative Cation efflux system protein CzcC id=1778315 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
putative heavy metal efflux system, outer membrane lipoprotein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_18
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16406..17182
DNA (777bp) protein (259aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; K07768 two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] Tax=RBG_13_Deltaproteobacteria_58_19_curated
Sensor histidine kinase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK19_THEYD
histidine kinase sensor of two-component system
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6123_19
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17891..18151)
DNA (261bp) protein (87aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
Displaying 19 items

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