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RBG_16_DPX2_64_85_RBG_16_scaffold_2480

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..87
DNA (87bp) protein (29aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

840..1910
DNA (1071bp) protein (357aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1982..2278
DNA (297bp) protein (99aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein id=3003664 bin=GWA2_Deltaproteo_65_63 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2375..3067)
DNA (693bp) protein (231aa)
glycine cleavage H-protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Glycine cleavage H-protein id=3110026 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
glycine cleavage H-protein
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3046..4341)
DNA (1296bp) protein (432aa)
polysulfide reductase Tax=RBG_16_Deltaproteobacteria_64_85_curated
polysulfide reductase NrfD id=14624881 bin=bin5_DeltaP species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4325..5218)
DNA (894bp) protein (298aa)
4Fe-4S ferredoxin, iron-sulfur binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4963246 bin=GWA2_Deltaproteo_65_63 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
4Fe-4S ferredoxin, iron-sulfur binding protein
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5246..5926)
DNA (681bp) protein (227aa)
glycine cleavage H-protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Glycine cleavage H-protein id=2013621 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
glycine cleavage H-protein
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5943..6653)
DNA (711bp) protein (237aa)
glycine cleavage system protein H Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=2013624 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
glycine cleavage H-protein
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7052..8422)
DNA (1371bp) protein (457aa)
Fis family transcriptional regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=3109898 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Fis family transcriptional regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8419..8934)
DNA (516bp) protein (172aa)
peptidase, zinc-dependent Tax=RBG_16_Deltaproteobacteria_64_85_curated
Peptidase, zinc-dependent id=2013628 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
peptidase, zinc-dependent
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8986..10581)
DNA (1596bp) protein (532aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Integral membrane sensor signal transduction histidine kinase id=3109881 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10743..11666
DNA (924bp) protein (308aa)
gspC; type II secretion system protein GspC serine protease; K02452 general secretion pathway protein C Tax=RBG_16_Deltaproteobacteria_64_85_curated
PDZ/DHR/GLGF domain-containing protein; K02452 general secretion pathway protein C id=14624430 bin=bin5_DeltaP species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
gspC; type II secretion system protein GspC, putative serine protease
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11681..13942
DNA (2262bp) protein (754aa)
general secretion pathway protein D; K02453 general secretion pathway protein D Tax=RBG_16_Deltaproteobacteria_64_85_curated
general secretion pathway protein D; K02453 general secretion pathway protein D id=14624431 bin=bin5_DeltaP species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
general secretion pathway protein D
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13947..15476
DNA (1530bp) protein (510aa)
type II secretion system protein E; K02454 general secretion pathway protein E Tax=RBG_16_Deltaproteobacteria_64_85_curated
general secretory pathway protein E; K02454 general secretion pathway protein E id=14624432 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
gspE; type II secretion system ATPase GspE
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15473..16693
DNA (1221bp) protein (407aa)
general secretion pathway protein F; K02455 general secretion pathway protein F Tax=RBG_16_Deltaproteobacteria_64_85_curated
general secretion pathway protein F; K02455 general secretion pathway protein F id=14624433 bin=bin5_DeltaP species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
general secretion pathway protein F
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16704..17159
DNA (456bp) protein (152aa)
gspG; type II secretion system pseudopilin GspG; K02456 general secretion pathway protein G Tax=RBG_16_Deltaproteobacteria_64_85_curated
gspG; type II secretion system pseudopilin GspG; K02456 general secretion pathway protein G id=14624434 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
general secretion pathway protein GspG
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17128..17640
DNA (513bp) protein (171aa)
id=4042301 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4042301 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17633..18001
DNA (369bp) protein (123aa)
id=14624436 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624436 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17998..18756
DNA (759bp) protein (253aa)
N-terminal methylation; K02459 general secretion pathway protein J Tax=RBG_16_Deltaproteobacteria_64_85_curated
gspJ; type II secretion system protein GspJ; K02459 general secretion pathway protein J id=14624437 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
gspJ; type II secretion system minor pseudopilin GspJ
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18753..19706
DNA (954bp) protein (318aa)
general secretion pathway protein K; K02460 general secretion pathway protein K Tax=RBG_16_Deltaproteobacteria_64_85_curated
General secretion pathway protein K id=4042293 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
general secretion pathway protein K
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19739..21301
DNA (1563bp) protein (521aa)
id=4042292 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=4042292 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21291..22148
DNA (858bp) protein (286aa)
id=14624440 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624440 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22157..23536
DNA (1380bp) protein (460aa)
id=14624441 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624441 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_24
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23526..24053
DNA (528bp) protein (176aa)
hypothetical protein; K02462 general secretion pathway protein M Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K02462 general secretion pathway protein M id=14624442 bin=bin5_DeltaP species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_25
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24050..24670
DNA (621bp) protein (207aa)
id=14624443 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624443 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_2480_26
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24849..26870
DNA (2022bp) protein (674aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=RBG_16_Deltaproteobacteria_64_85_curated
Peptidase S8 and S53 subtilisin kexin sedolisin id=4042284 bin=GWC2_Proteo_65_14_Ab886 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
peptidase S8/S53 subtilisin kexin sedolisin
Displaying 26 items

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