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RBG_16_DPX2_64_85_RBG_16_scaffold_803

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_803_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..544)
DNA (543bp) protein (181aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Prolipoprotein diacylglyceryl transferase id=5035998 bin=GWA2_Deltaproteo_65_63 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
prolipoprotein diacylglyceryl transferase
RBG_16_DPX2_64_85_RBG_16_scaffold_803_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(525..1031)
DNA (507bp) protein (169aa)
lspA; lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=RBG_16_Deltaproteobacteria_64_85_curated
lspA; Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (SPase II) (Signal peptidase II) (EC:3.4.23.36) id=14624888 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
peptidase A8
RBG_16_DPX2_64_85_RBG_16_scaffold_803_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1041..3824)
DNA (2784bp) protein (928aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_16_Deltaproteobacteria_64_85_curated
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=14624889 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
ileS; isoleucyl-tRNA synthetase
RBG_16_DPX2_64_85_RBG_16_scaffold_803_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3871..6081)
DNA (2211bp) protein (737aa)
1A family penicillin-binding protein; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
1A family penicillin-binding protein; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] id=14624890 bin=bin5_DeltaP species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
1A family penicillin-binding protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6156..7175)
DNA (1020bp) protein (340aa)
3-deoxy-7-phosphoheptulonate synthase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RBG_16_Deltaproteobacteria_64_85_curated
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] id=14624891 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
aroG-2; 3-deoxy-7-phosphoheptulonate synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_803_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7305..7970
DNA (666bp) protein (222aa)
id=14624892 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14624892 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_803_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8039..8845
DNA (807bp) protein (269aa)
S-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Deltaproteobacteria_64_85_curated
S-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
Probable 6-oxopurine nucleoside phosphorylase id=3640476 bin=GWC2_Proteo_65_14_Ab886 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_803_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8842..9123
DNA (282bp) protein (94aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624894 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_803_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9143..9415
DNA (273bp) protein (91aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein-like protein id=3640472 bin=GWC2_Proteo_65_14_Ab886 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9584..9874
DNA (291bp) protein (97aa)
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RBG_16_Deltaproteobacteria_64_85_curated
chaperonin Cpn10; K04078 chaperonin GroES id=14624896 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
groES; co-chaperonin GroES
RBG_16_DPX2_64_85_RBG_16_scaffold_803_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9914..11542
DNA (1629bp) protein (543aa)
groEL; chaperonin GroEL; K04077 chaperonin GroEL Tax=RBG_16_Deltaproteobacteria_64_85_curated
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL id=14624897 bin=bin5_DeltaP species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
groEL; chaperonin GroEL
RBG_16_DPX2_64_85_RBG_16_scaffold_803_12
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11616..11891
DNA (276bp) protein (92aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
FmdB family regulatory protein id=14624898 bin=bin5_DeltaP species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
regulatory protein, CxxC_CxxC_SSSS domain-containing
RBG_16_DPX2_64_85_RBG_16_scaffold_803_13
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11973..12833
DNA (861bp) protein (287aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RBG_16_Deltaproteobacter
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=14624899 bin=bin5_DeltaP species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
RBG_16_DPX2_64_85_RBG_16_scaffold_803_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12918..13217
DNA (300bp) protein (100aa)
glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Glycine cleavage system H protein id=5036012 bin=GWA2_Deltaproteo_65_63 species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Glycine cleavage system H protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_15
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13214..14014)
DNA (801bp) protein (267aa)
TonB family protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
TonB family protein id=14624901 bin=bin5_DeltaP species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
TonB family protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_16
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14336..14842
DNA (507bp) protein (169aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Uncharacterized protein id=3640453 bin=GWC2_Proteo_65_14_Ab886 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rhomboid family protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14967..15251
DNA (285bp) protein (95aa)
huP-2; DNA-binding protein HU; K03530 DNA-binding protein HU-beta Tax=RBG_16_Deltaproteobacteria_64_85_curated
Histone family protein DNA-binding protein id=3640451 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
transcriptional regulator HU subunit alpha
RBG_16_DPX2_64_85_RBG_16_scaffold_803_18
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15336..15794
DNA (459bp) protein (153aa)
UspA domain-containing protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
UspA domain-containing protein id=14624904 bin=bin5_DeltaP species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
UspA domain-containing protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15881..17164
DNA (1284bp) protein (428aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Deltaproteobacteria_64_85_curated
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=14624905 bin=bin5_DeltaP species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
enolase (EC:4.2.1.11)
RBG_16_DPX2_64_85_RBG_16_scaffold_803_20
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17166..18704
DNA (1539bp) protein (513aa)
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1) Tax=RBG_16_Deltaproteobacteria_64_85_curated
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1) id=14624906 bin=bin5_DeltaP species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
RBG_16_DPX2_64_85_RBG_16_scaffold_803_21
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18725..20434
DNA (1710bp) protein (570aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Response regulator id=3640346 bin=GWC2_Proteo_65_14_Ab886 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_22
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20479..20811
DNA (333bp) protein (111aa)
id=3640344 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=3640344 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_803_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20816..21661
DNA (846bp) protein (282aa)
amidohydrolase 2; K07045 Tax=RBG_16_Deltaproteobacteria_64_85_curated
amidohydrolase 2; K07045 id=14624909 bin=bin5_DeltaP species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_803_trna_1
unknown

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21730..21808
DNA (79bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_803_24
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21857..23146
DNA (1290bp) protein (430aa)
trigger factor; K03545 trigger factor Tax=RBG_16_Deltaproteobacteria_64_85_curated
Trigger factor id=3640341 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
trigger factor
RBG_16_DPX2_64_85_RBG_16_scaffold_803_25
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23143..23751
DNA (609bp) protein (203aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RBG_16_Deltaproteobacteria_64_85_curated
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=2315880 bin=GWB2_Deltaproteobacteria_65_81 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_803_26
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23765..25018
DNA (1254bp) protein (418aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RBG_16_Deltaproteobacteria_64_85_curated
ATP-dependent Clp protease ATP-binding subunit ClpX id=3640335 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
clpX; ATP-dependent protease ATP-binding subunit ClpX
RBG_16_DPX2_64_85_RBG_16_scaffold_803_27
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25069..27486
DNA (2418bp) protein (806aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Lon protease id=3640332 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ATP-dependent protease La
RBG_16_DPX2_64_85_RBG_16_scaffold_803_28
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27489..28481)
DNA (993bp) protein (331aa)
saccharopine dehydrogenase Tax=RBG_16_Deltaproteobacteria_64_85_curated
Saccharopine dehydrogenase id=3640330 bin=GWC2_Proteo_65_14_Ab886 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
saccharopine dehydrogenase
Displaying 29 items

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