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RBG_16_DPX2_64_85_RBG_16_scaffold_125

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Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_125_31
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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29264..29878
DNA (615bp) protein (205aa)
pilus assembly protein, PilO; K02664 type IV pilus assembly protein PilO Tax=RBG_16_Deltaproteobacteria_64_85_curated
Pilus assembly protein PilO id=3089025 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
pilO; type IV pilus biogenesis protein PilO
RBG_16_DPX2_64_85_RBG_16_scaffold_125_32
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29875..30420
DNA (546bp) protein (182aa)
pilP; PilP protein; K02665 type IV pilus assembly protein PilP Tax=RBG_16_Deltaproteobacteria_64_85_curated
pilus assembly protein, PilP-like; K02665 type IV pilus assembly protein PilP id=14623459 bin=bin5_DeltaP species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
fimbrial assembly protein
RBG_16_DPX2_64_85_RBG_16_scaffold_125_33
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30423..32693
DNA (2271bp) protein (757aa)
pilQ; type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ Tax=RBG_16_Deltaproteobacteria_64_85_curated
type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ id=14623460 bin=bin5_DeltaP species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
pilQ; type IV pilus secretin PilQ
RBG_16_DPX2_64_85_RBG_16_scaffold_125_34
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32756..33967
DNA (1212bp) protein (404aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RBG_16_Deltaproteobacteria_64_85_curated
AroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] id=14623461 bin=bin5_DeltaP species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
chorismate synthase (EC:4.2.3.5)
RBG_16_DPX2_64_85_RBG_16_scaffold_125_35
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33964..34521
DNA (558bp) protein (186aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] id=14623462 bin=bin5_DeltaP species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
shikimate kinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
shikimate kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_36
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34518..36254
DNA (1737bp) protein (579aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4) Tax=RBG_16_Deltaproteobacteria_64_85_curated
3-dehydroquinate synthase id=2335589 bin=GWA2_Deltaproteo_65_63 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
3-dehydroquinate synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_37
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36232..36591
DNA (360bp) protein (120aa)
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=3089051 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_125_38
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36588..37061
DNA (474bp) protein (158aa)
aroQ; 3-dehydroquinate dehydrogenase AroQ (EC:4.2.1.10) Tax=RBG_16_Deltaproteobacteria_64_85_curated
aroQ; 3-dehydroquinate dehydratase type 2 (EC:4.2.1.10) id=14623465 bin=bin5_DeltaP species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
aroQ; 3-dehydroquinate dehydrogenase AroQ (EC:4.2.1.10)
RBG_16_DPX2_64_85_RBG_16_scaffold_125_39
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37048..38121
DNA (1074bp) protein (358aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Deltaproteobacteria_64_85_curated
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=14623466 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
peptidase M24
RBG_16_DPX2_64_85_RBG_16_scaffold_125_40
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38137..38694
DNA (558bp) protein (186aa)
elongation factor P; K02356 elongation factor P Tax=RBG_16_Deltaproteobacteria_64_85_curated
translation elongation factor P; K02356 elongation factor P id=14623467 bin=bin5_DeltaP species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
elongation factor P
RBG_16_DPX2_64_85_RBG_16_scaffold_125_41
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38718..39170
DNA (453bp) protein (151aa)
acetyl-CoA carboxylase biotin carboxyl carrier protein (EC:6.4.1.2)
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein id=14623468 bin=bin5_DeltaP species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_125_42
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39181..40518
DNA (1338bp) protein (446aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RBG_16_Deltaproteobacteria_64_85_curated
Acetyl-CoA carboxylase, biotin carboxylase id=3089065 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
acetyl-CoA carboxylase, biotin carboxylase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_43
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40577..41890
DNA (1314bp) protein (438aa)
TPR domain-containing protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
TPR repeat-containing protein id=2335605 bin=GWA2_Deltaproteo_65_63 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
TPR domain-containing protein
RBG_16_DPX2_64_85_RBG_16_scaffold_125_trna_1
unknown

Not on your lists

41960..42031
DNA (72bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_125_44
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42137..46423
DNA (4287bp) protein (1429aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=3089069 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_125_45
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46410..49175
DNA (2766bp) protein (922aa)
outer membrane protein, OMP85 family; K07277 outer membrane protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
outer membrane protein, OMP85 family; K07277 outer membrane protein id=14623473 bin=bin5_DeltaP species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
OMP85 family outer membrane protein
RBG_16_DPX2_64_85_RBG_16_scaffold_125_46
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49333..50709
DNA (1377bp) protein (459aa)
diguanylate cyclase Tax=RBG_16_Deltaproteobacteria_64_85_curated
diguanylate cyclase id=14623475 bin=bin5_DeltaP species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
diguanylate cyclase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_47
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50728..51417
DNA (690bp) protein (230aa)
periplasmic sensor signal transduction histidine kinase Tax=RBG_16_Deltaproteobacteria_64_85_curated
integral membrane sensor signal transduction histidine kinase id=14623477 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
periplasmic sensor signal transduction histidine kinase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_48
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51519..51800
DNA (282bp) protein (94aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_125_49
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51927..52709
DNA (783bp) protein (261aa)
signal peptide Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein id=14624915 bin=bin5_DeltaP species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
signal peptide
RBG_16_DPX2_64_85_RBG_16_scaffold_125_trna_2
unknown

Not on your lists

comp(52909..52992)
DNA (84bp)
transferRNA
RBG_16_DPX2_64_85_RBG_16_scaffold_125_50
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53064..55310
DNA (2247bp) protein (749aa)
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=RBG_16_Deltaproteobacteria_64_85_curated
rnr; exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] id=14623478 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
rnr; exoribonuclease R
RBG_16_DPX2_64_85_RBG_16_scaffold_125_51
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55335..56432
DNA (1098bp) protein (366aa)
response regulator Tax=RBG_16_Deltaproteobacteria_64_85_curated
response regulator receiver protein id=14623481 bin=bin5_DeltaP species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
response regulator
RBG_16_DPX2_64_85_RBG_16_scaffold_125_52
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


56429..59077
DNA (2649bp) protein (883aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_16_Deltaproteobacteria_64_85_curated
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=14623482 bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
valyl-tRNA synthetase (EC:6.1.1.9)
RBG_16_DPX2_64_85_RBG_16_scaffold_125_53
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59221..59898
DNA (678bp) protein (226aa)
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=RBG_16_Deltaproteobacteria_64_85_curated
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] id=14623483 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
Nicotinate-nucleotide pyrophosphorylase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_54
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59898..60524
DNA (627bp) protein (209aa)
id=14623484 Tax=RBG_16_Deltaproteobacteria_64_85_curated
id=14623484 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_125_55
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60527..60904
DNA (378bp) protein (126aa)
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RBG_16_Deltaproteobacteria_64_85_curated
queuosine biosynthesis protein QueD; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] id=14623485 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
6-pyruvoyl-tetrahydropterin synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_56
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60912..61106)
DNA (195bp) protein (65aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Putative uncharacterized protein id=4502725 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RBG_16_DPX2_64_85_RBG_16_scaffold_125_57
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61152..61985)
DNA (834bp) protein (278aa)
mqnA; futalosine synthase; K07081 Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein; K07081 id=14623487 bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
mqnA; futalosine synthase
RBG_16_DPX2_64_85_RBG_16_scaffold_125_58
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61982..63187)
DNA (1206bp) protein (402aa)
putative ABC transporter protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
putative ABC transporter protein id=14623488 bin=bin5_DeltaP species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative ABC transporter protein
Displaying items 31-60 of 108 in total

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