ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_20763_4

Organism: Deltaproteobacteria bacterium RBG_16_64_85

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 1785..2447

Top 3 Functional Annotations

Value Algorithm Source
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RBG_16_Deltaproteobacteria_64_85_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 427
  • Evalue 1.00e-116
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=14623388 bin=bin5_DeltaP species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 219.0
  • Bit_score: 299
  • Evalue 2.20e-78
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 219.0
  • Bit_score: 139
  • Evalue 1.10e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_64_85_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGCCATGTTGGAACTGGCGGCGGCCCGCCGCCTGCACACCGGGAAGGAAAAGAACCGGAAGCGGCTCGTCCAGGGGATGGTTCCGGGGGTCATATACGGCAAGGGGATCGAGACGCGGCCGCTGGAATTCGAGCGCCGCGAACTGGAGAAATTCCTCGCCACCGCCCGGCGGGGGACGGTGGTCGTCAAGGTGAGCGTCACGGACGGTGCCGGCGCGAAGGAGTCGTTCGCGGTTCTCAAGGACGTCCAGACGGATCCCGTCACCGACCGCGTGATCCACGTGGACTTCTACGAGGTGGCCCACGGCCGGAAGTTCCGGATCGAGGTGCCGCTCAAGCTCCGGGGAAAAGCTGCAGGGATCGAGCTGGGGGGCATCCTCGAGCAGGTCGTCCGCAGCCTCGAGGTCGAGTGCACCCCGGATAGCGTCCCCGAGTTCGTCGAACTCAACGTGGCGCACCTGGGAATCGGCCAGTCGCTGCACCTGGGGAACGTCGTGTTCCCCGCGGGCGTCCAGCCCGTCGAAAAGGACATGAAGATGACCATCGCCTCGGTCCACACGCCGAAGGTCGAGGAAGTGGTCACCGTGGCGCCGGAGGAAGGCGCGGAAGCGGCGGTGGAAGGCGCCAGCGTTGCGGAACCTGCGGAGAAGGAGAAAGCCTAG
PROTEIN sequence
Length: 221
MAMLELAAARRLHTGKEKNRKRLVQGMVPGVIYGKGIETRPLEFERRELEKFLATARRGTVVVKVSVTDGAGAKESFAVLKDVQTDPVTDRVIHVDFYEVAHGRKFRIEVPLKLRGKAAGIELGGILEQVVRSLEVECTPDSVPEFVELNVAHLGIGQSLHLGNVVFPAGVQPVEKDMKMTIASVHTPKVEEVVTVAPEEGAEAAVEGASVAEPAEKEKA*