ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_20763

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_1
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..281
DNA (279bp) protein (93aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=RBG_16_Deltaproteobacteria_64_85_curated
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase id=3640327 bin=GWC2_Proteo_65_14_Ab886 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(354..557)
DNA (204bp) protein (68aa)
Tax=RBG_16_Deltaproteobacteria_64_85_curated
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_3
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

836..1771
DNA (936bp) protein (312aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RBG_16_Deltaproteobacteria_64_85_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=2246746 bin=GWB2_Deltaproteobacteria_65_81 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_4
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1785..2447
DNA (663bp) protein (221aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RBG_16_Deltaproteobacteria_64_85_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=14623388 bin=bin5_DeltaP species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_5
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2416..3114
DNA (699bp) protein (233aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RBG_16_Deltaproteobacteria_64_85_curated
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=14623389 bin=bin5_DeltaP species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
peptidyl-tRNA hydrolase (EC:3.1.1.29)
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3120..3506
DNA (387bp) protein (129aa)
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RBG_16_Deltaproteobacteria_64_85_curated
30S ribosomal protein S6 id=3138660 bin=GWA2_Deltaproteo_65_63 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
30S ribosomal protein S6
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3522..3929
DNA (408bp) protein (136aa)
ssb; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
Single-stranded DNA-binding protein id=3516927 bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
ssb; single-stranded DNA-binding protein
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3978..4268
DNA (291bp) protein (97aa)
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RBG_16_Deltaproteobacteria_64_85_curated
30S ribosomal protein S18 id=3516924 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
30S ribosomal protein S18
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4282..4728
DNA (447bp) protein (149aa)
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RBG_16_Deltaproteobacteria_64_85_curated
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=14623393 bin=bin5_DeltaP species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
50S ribosomal protein L9
RBG_16_DPX2_64_85_RBG_16_scaffold_20763_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4789..5553
DNA (765bp) protein (255aa)
replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RBG_16_Deltaproteobacteria_64_85_curated
replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] id=14623394 bin=bin5_DeltaP species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
replicative DNA helicase (EC:3.6.1.-)
Displaying 10 items

View Taxonomy