ggKbase home page

RBG_16_DPX2_64_85_RBG_16_scaffold_125_20

Organism: Deltaproteobacteria bacterium RBG_16_64_85

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 19765..20205

Top 3 Functional Annotations

Value Algorithm Source
pilA; pilin; K02650 type IV pilus assembly protein PilA Tax=RBG_16_Deltaproteobacteria_64_85_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 146.0
  • Bit_score: 297
  • Evalue 1.00e-77
Type IV pilin PilA id=4219538 bin=GWC2_Proteo_65_14_Ab886 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 149.0
  • Bit_score: 163
  • Evalue 2.20e-37
pilA; pilin similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 125.0
  • Bit_score: 89
  • Evalue 6.60e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_64_85_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGAAGGAAAACAGTGGGTTCACGCTGATCGAGTTGATGCTCGTCGTGGCCGTCGTTGCCCTCCTGGCGGCGATCGCGATCCCCAATTACCTGAAATTCGTCGGCAAGACCCGCCGTGCCGAGGTGAAATACAACCTTGAGGCAATCTTCAAGGCCGAGGTCTCATGGTGCGGCGAAAGGAACGTTTTCAATAGTGATTTCAATTCGATACGCTGGAAACCCGTTGGCGCGATTTATTACTATACCTTCTCGCTGGGGGCGGGGACCGAAGGCTTGTCCGTCGCCGCGAATCCGATGCCGGCCGCCGCGGTTCCGTTCGCAAATGACAACGCGTTCGCCGCCTACGGGTGGGGCAATATCGATTCCGACGCAACGGTCGACGTCTGGCACATCGACGAACGGAATAACCTGGTTAACGACGTCGACGACCTCGCTTCGTGA
PROTEIN sequence
Length: 147
MKENSGFTLIELMLVVAVVALLAAIAIPNYLKFVGKTRRAEVKYNLEAIFKAEVSWCGERNVFNSDFNSIRWKPVGAIYYYTFSLGAGTEGLSVAANPMPAAAVPFANDNAFAAYGWGNIDSDATVDVWHIDERNNLVNDVDDLAS*