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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_1
unknown

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3..77
DNA (75bp) protein (25aa)
OmpH protein id=3308822 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
OmpH protein id=3308822 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Outer membrane chaperone Skp (OmpH); K06142 outer membrane protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

434..973
DNA (540bp) protein (180aa)
OmpH-like outer membrane protein
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1171..1935
DNA (765bp) protein (255aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RBG_16_Gamma2_65_34_curated
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=SYL_NITMU
Suspect SCG annotation. See neighboring gene [RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_4].
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1932..3902
DNA (1971bp) protein (657aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RBG_16_Gamma2_65_34_curated
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=SYL_NITMU
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3899..4465
DNA (567bp) protein (189aa)
lipoprotein B transmembrane n=1 Tax=Janthinobacterium lividum RepID=UPI000288604A
rlpB; putative lipoprotein B transmembrane protein; K03643 LPS-assembly lipoprotein Tax=RBG_16_Gamma2_65_34_curated
rlpB; putative lipoprotein B transmembrane protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4531..5553
DNA (1023bp) protein (341aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RBG_16_Gamma2_65_34_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase III subunit delta n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036CD710
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5550..6860
DNA (1311bp) protein (437aa)
gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RBG_16_Gamma2_65_34_curated
Gamma-glutamyl phosphate reductase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GV10_THISH
gamma-glutamyl phosphate reductase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6933..7589
DNA (657bp) protein (219aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Gamma2_65_34_curated
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GV09_THISH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7570..7965
DNA (396bp) protein (132aa)
Ribosomal silencing factor RsfS n=1 Tax=uncultured gamma proteobacterium RepID=H5SEB9_9GAMM
polyA polymerase, iojap protein; K09710 ribosome-associated protein Tax=RBG_16_Gamma2_65_34_curated
iojap-related protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8240..8707
DNA (468bp) protein (156aa)
methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=RBG_16_Gamma2_65_34_curated
Ribosomal RNA large subunit methyltransferase H n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6C0Y5_9GAMM
methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8822..9400
DNA (579bp) protein (193aa)
Maf-like protein SPISAL_07225 n=1 Tax=Spiribacter salinus M19-40 RepID=R4V6I8_9GAMM
maf protein Tax=RBG_16_Gamma2_65_34_curated
maf protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_18755_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9397..10902
DNA (1506bp) protein (502aa)
Cytoplasmic axial filament protein n=1 Tax=Pseudomonas plecoglossicida NB2011 RepID=S2KV14_9PSED
cytoplasmic axial filament protein Tax=RBG_16_Gamma2_65_34_curated
ribonuclease G
Displaying 12 items

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