ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..456
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A8D27
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(610..966)
DNA (357bp) protein (119aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1228..1593
DNA (366bp) protein (122aa)
Sulfur relay protein, TusE/DsrC/DsvC family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACU4_9PROT
dsrC; sulfur relay protein, TusE/DsrC/DsvC family Tax=RBG_16_Gamma2_65_34_curated
dsrC; sulfur relay protein, TusE/DsrC/DsvC family
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1701..2615
DNA (915bp) protein (305aa)
Aldose 1-epimerase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZZ2_9PROT
aldose 1-epimerase Tax=RBG_16_Gamma2_65_34_curated
aldose 1-epimerase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3187..5745)
DNA (2559bp) protein (853aa)
Cation transporting P-type ATPase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVD8_METCG
cation transporting P-type ATPase Tax=RBG_16_Gamma2_65_34_curated
cation transporting P-type ATPase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5887..6030)
DNA (144bp) protein (48aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6027..6254)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L394_9CYAN
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6377..10102)
DNA (3726bp) protein (1242aa)
5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RBG_16_Gamma2_65_34_curated
5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13)
Methionine synthase I, cobalamin-binding domain containing protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T2E6_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10331..11353)
DNA (1023bp) protein (341aa)
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RBG_16_Gamma2_65_34_curated
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase n=4 Tax=Rhodopirellula baltica RepID=F2AWG8_RHOBT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11350..12411)
DNA (1062bp) protein (354aa)
Blr7450 protein n=7 Tax=Bradyrhizobium RepID=Q89DI9_BRAJA id=5223136 bin=16ft_combo_ws3_JS1 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12630..13490
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035F8C8D
MltA-interacting MipA family protein Tax=RBG_16_Gamma2_65_34_curated
MltA-interacting MipA family protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13490..13810
DNA (321bp) protein (107aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14126..15223
DNA (1098bp) protein (366aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RBG_16_Gamma2_65_34_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DCX1_9ALTE
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15400..16179
DNA (780bp) protein (260aa)
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RBG_16_Gamma2_65_34_curated
Uncharacterized protein id=1724320 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16204..16857
DNA (654bp) protein (218aa)
organic solvents resistance ABC transporter ATPase-like protein Tax=RBG_16_Gamma2_65_34_curated
ABC-type transport system involved in resistance to organic solvents ATPase component-like protein id=1724319 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
organic solvents resistance ABC transporter ATPase-like protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16862..17641
DNA (780bp) protein (260aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
Mammalian cell entry related domain protein id=1724318 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17657..18514
DNA (858bp) protein (286aa)
TPR repeat-containing protein Tax=RBG_16_Gamma2_65_34_curated
Tetratricopeptide repeat protein id=1724317 bin=GWB2_Nitrospirae_rel_47_37 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
TPR repeat-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4862_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18738..18986
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0X0_9RHIZ
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
Displaying 18 items

View Taxonomy