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RBG_16_NSX_64_22_RBG_16_scaffold_1502

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_1502_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(3..488)
DNA (486bp) protein (162aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RBG_16_Nitrospirae_64_22_curated
DNA primase id=3214744 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA primase
RBG_16_NSX_64_22_RBG_16_scaffold_1502_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(570..1028)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB08_THET1
hypothetical protein; K09117 hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_1502_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1039..1236)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=4 Tax=Leptospirillum RepID=J9ZDE5_LEPFM
rpsU; 30S ribosomal protein S21 Tax=RBG_16_Nitrospirae_64_22_curated
rpsU; 30S ribosomal protein S21
RBG_16_NSX_64_22_RBG_16_scaffold_1502_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1428..1772)
DNA (345bp) protein (115aa)
HIT domain-containing protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Nitrospirae_64_22_curated
Histidine triad (HIT) protein id=4683445 bin=GWC2_Nitrospirae_57_13 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
HIT domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_1502_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1894..2430)
DNA (537bp) protein (179aa)
phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31); K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RBG_16_Nitrospirae_64_22_curate
phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NPD1_MARHT
RBG_16_NSX_64_22_RBG_16_scaffold_1502_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2535..3335)
DNA (801bp) protein (267aa)
hisF; imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] Tax=RBG_16_Nitrospirae_64_22_curated
Imidazole glycerol phosphate synthase subunit HisF id=3219092 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hisF; imidazole glycerol phosphate synthase subunit HisF
RBG_16_NSX_64_22_RBG_16_scaffold_1502_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(3339..4070)
DNA (732bp) protein (244aa)
hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (EC:5.3.1.16) Tax=RBG_16_Nitrospirae_64_22_curated
hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (EC:5.3.1.16)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000375528C
RBG_16_NSX_64_22_RBG_16_scaffold_1502_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4067..4696)
DNA (630bp) protein (210aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RBG_16_Nitrospirae_64_22_curated
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8T1_GEOUR
hisH; imidazole glycerol phosphate synthase subunit HisH
RBG_16_NSX_64_22_RBG_16_scaffold_1502_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4797..5390)
DNA (594bp) protein (198aa)
hisB; imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RBG_16_Nitrospirae_64_22_curated
imidazoleglycerol-phosphate dehydratase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B09C
hisB; imidazoleglycerol-phosphate dehydratase
RBG_16_NSX_64_22_RBG_16_scaffold_1502_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5387..6463)
DNA (1077bp) protein (359aa)
hisC; histidinol-phosphate aminotransferase 2 (Imidazole acetol-phosphate transaminase 2) (EC:2.6.1.9) Tax=RBG_16_Nitrospirae_64_22_curated
hisC; histidinol-phosphate aminotransferase 2 (Imidazole acetol-phosphate transaminase 2) (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI01_9BACT
RBG_16_NSX_64_22_RBG_16_scaffold_1502_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6460..7812)
DNA (1353bp) protein (451aa)
hisD; histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RBG_16_Nitrospirae_64_22_curated
Histidinol dehydrogenase id=4677560 bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase
RBG_16_NSX_64_22_RBG_16_scaffold_1502_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(7809..8522)
DNA (714bp) protein (238aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=RBG_16_Nitrospirae_64_22_curated
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8T4_GEOUR
RBG_16_NSX_64_22_RBG_16_scaffold_1502_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8670..9926)
DNA (1257bp) protein (419aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RBG_16_Nitrospirae_64_22_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4948400 bin=GWC2_Nitrospirae_57_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_1502_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(9911..10864)
DNA (954bp) protein (318aa)
hemK; protoporphyrinogen oxidase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RBG_16_Nitrospirae_64_22_curated
Release factor glutamine methyltransferase id=4948401 bin=GWC2_Nitrospirae_57_13 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_1502_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10861..11955)
DNA (1095bp) protein (365aa)
Peptide chain release factor 1 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQ57_DESK7
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RBG_16_Nitrospirae_64_22_curated
peptide chain release factor 1
RBG_16_NSX_64_22_RBG_16_scaffold_1502_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


comp(12134..12394)
DNA (261bp) protein (87aa)
ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RBG_16_Nitrospirae_64_22_curated
50S ribosomal protein L31 id=14625930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ribosomal protein L31
RBG_16_NSX_64_22_RBG_16_scaffold_1502_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(12546..13796)
DNA (1251bp) protein (417aa)
rho; transcription termination factor Rho (EC:3.6.1.-); K03628 transcription termination factor Rho Tax=RBG_16_Nitrospirae_64_22_curated
rho; transcription termination factor Rho (EC:3.6.1.-)
Transcription termination factor Rho id=1915326 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RBG_16_NSX_64_22_RBG_16_scaffold_1502_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

14447..15340
DNA (894bp) protein (298aa)
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003086215
heat shock protein HtpX rbh
RBG_16_NSX_64_22_RBG_16_scaffold_1502_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

15422..16063
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JXC8_SYNJA
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_1502_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

16064..21238
DNA (5175bp) protein (1725aa)
alpha-2-macroglobulin; K06894 Tax=RBG_16_Nitrospirae_64_22_curated
Alpha-2-macroglobulin domain protein id=4791381 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
alpha-2-macroglobulin
RBG_16_NSX_64_22_RBG_16_scaffold_1502_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

21299..21649
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B62D9C
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_1502_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

21646..21879
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JPL6_9GAMM
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_1502_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

21890..22126
DNA (237bp) protein (79aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_1502_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(22277..22603)
DNA (327bp) protein (109aa)
Virulence-associated protein I n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLE8_9DELT
XRE family plasmid maintenance system antidote protein Tax=RBG_16_Nitrospirae_64_22_curated
XRE family transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_1502_25
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(22701..23114)
DNA (414bp) protein (138aa)
Ribonuclease VapC n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI74_9BACT
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_1502_26
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(23101..23322)
DNA (222bp) protein (74aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_1502_27
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

23590..24771
DNA (1182bp) protein (394aa)
msrA2; bifunctional methionine sulfoxide reductase B/A protein (EC:1.8.4.11); K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] Tax=RBG_16_Nitrospirae_64_22_curated
msrA2; bifunctional methionine sulfoxide reductase B/A protein (EC:1.8.4.11)
Bifunctional methionine sulfoxide reductase B/A protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRU4_9BACT
RBG_16_NSX_64_22_RBG_16_scaffold_1502_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

26195..26623
DNA (429bp) protein (143aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_1502_29
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

26655..27377
DNA (723bp) protein (241aa)
Protein serine/threonine phosphatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAL1_9BURK
protein serine/threonine phosphatase Tax=RBG_16_Nitrospirae_64_22_curated
protein serine/threonine phosphatase
RBG_16_NSX_64_22_RBG_16_scaffold_1502_30
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

27384..29555
DNA (2172bp) protein (724aa)
Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) (EC:2.7.7.42) Tax=RBG_16_Nitrospirae_64_22_curated
Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase id=4972253 bin=GWA2_OP3_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Displaying 30 items

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