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RBG_16_NSX_64_22_RBG_16_scaffold_6829

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_6829_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(82..1122)
DNA (1041bp) protein (347aa)
Molybdopterin binding domain n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NU10_9DELT
molybdopterin binding domain protein Tax=RBG_16_Nitrospirae_64_22_curated
molybdopterin binding domain protein
RBG_16_NSX_64_22_RBG_16_scaffold_6829_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1509..3044)
DNA (1536bp) protein (512aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
putative nitrate reductase gamma subunit id=14429774 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
peptidase S41
RBG_16_NSX_64_22_RBG_16_scaffold_6829_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(3118..3786)
DNA (669bp) protein (223aa)
DMSO reductase family type II enzyme chaperone Tax=RBG_16_Nitrospirae_64_22_curated
DMSO reductase family type II enzyme chaperone id=14626672 bin=bin7_NC10_sister species=Thauera selenatis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DMSO reductase family type II enzyme chaperone
RBG_16_NSX_64_22_RBG_16_scaffold_6829_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(3786..4997)
DNA (1212bp) protein (404aa)
DMSO reductase family type II enzyme, iron-sulfur subunit Tax=RBG_16_Nitrospirae_64_22_curated
DMSO reductase family type II enzyme, iron-sulfur subunit id=14626671 bin=bin7_NC10_sister species=Halomonas jeotgali genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DMSO reductase family type II enzyme, iron-sulfur subunit
RBG_16_NSX_64_22_RBG_16_scaffold_6829_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(5045..7990)
DNA (2946bp) protein (982aa)
DMSO reductase family type II enzyme, molybdopterin subunit; K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4] Tax=RBG_16_Nitrospirae_64_22_curated
DMSO reductase family type II enzyme, molybdopterin subunit; K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4] id=14626670 bin=bin7_NC10_sister species=Thauera selenatis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DMSO reductase family type II enzyme, molybdopterin subunit
RBG_16_NSX_64_22_RBG_16_scaffold_6829_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8210..8854)
DNA (645bp) protein (215aa)
putative sensory transcriptional regulator, LuxR family Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein id=14626612 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
putative sensory transcriptional regulator, LuxR family
RBG_16_NSX_64_22_RBG_16_scaffold_6829_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(8992..9672)
DNA (681bp) protein (227aa)
Sulfurtransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARX7_RUBXD
ArsR family transcriptional regulator Tax=RBG_16_Nitrospirae_64_22_curated
ArsR family transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_6829_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(9949..10842)
DNA (894bp) protein (298aa)
Periplasmic nitrate reductase subunit NapH n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U151_SULKY
periplasmic nitrate reductase subunit naph; K02574 ferredoxin-type protein NapH Tax=RBG_16_Nitrospirae_64_22_curated
periplasmic nitrate reductase subunit naph
RBG_16_NSX_64_22_RBG_16_scaffold_6829_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10951..11688)
DNA (738bp) protein (246aa)
MauM/NapG family ferredoxin-type protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WK71_GEOS8
MauM/NapG family ferredoxin-type protein; K02573 ferredoxin-type protein NapG Tax=RBG_16_Nitrospirae_64_22_curated
napG; quinol dehydrogenase
RBG_16_NSX_64_22_RBG_16_scaffold_6829_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(11870..12160)
DNA (291bp) protein (97aa)
Nitrate reductase biosynthesis protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI66_9PROT
napD; nitrate reductase biosynthesis protein Tax=RBG_16_Nitrospirae_64_22_curated
napD; nitrate reductase biosynthesis protein
RBG_16_NSX_64_22_RBG_16_scaffold_6829_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(12160..13140)
DNA (981bp) protein (327aa)
NB-ARC domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GB84_CHLAD
WD40 repeat-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_6829_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13171..13626)
DNA (456bp) protein (152aa)
Periplasmic nitrate reductase, electron transfer subunit n=1 Tax=Helicobacter bizzozeronii (strain CIII-1) RepID=F8KRN0_HELBC
nitrate reductase cytochrome c550-type subunit; K02568 cytochrome c-type protein NapB Tax=RBG_16_Nitrospirae_64_22_curated
nitrate reductase cytochrome c550-type subunit
RBG_16_NSX_64_22_RBG_16_scaffold_6829_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(13639..16164)
DNA (2526bp) protein (842aa)
Nitrate reductase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB21_9PROT
napA; periplasmic nitrate reductase, large subunit Tax=RBG_16_Nitrospirae_64_22_curated
napA; periplasmic nitrate reductase, large subunit
RBG_16_NSX_64_22_RBG_16_scaffold_6829_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16410..18614)
DNA (2205bp) protein (735aa)
bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase Tax=RBG_16_Nitrospirae_64_22_curated
Alpha amylase, catalytic subdomain id=3903274 bin=GWC2_Methylomirabilis_70_16 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase
RBG_16_NSX_64_22_RBG_16_scaffold_6829_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18611..20113)
DNA (1503bp) protein (501aa)
ATPase AAA Tax=RBG_16_Nitrospirae_64_22_curated
AAA ATPase id=14430372 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
ATPase AAA
RBG_16_NSX_64_22_RBG_16_scaffold_6829_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(20128..20445)
DNA (318bp) protein (106aa)
rubrerythrin n=2 Tax=Aminicenantes RepID=UPI0003B78ECC
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_6829_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

20726..21505
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000376FB84
Curli production assembly/transport component CsgG Tax=RBG_16_Nitrospirae_64_22_curated
Curli production assembly/transport component CsgG
RBG_16_NSX_64_22_RBG_16_scaffold_6829_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(21768..22766)
DNA (999bp) protein (333aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQN9_GEOS8
response regulator receiver modulated diguanylate cyclase Tax=RBG_16_Nitrospirae_64_22_curated
response regulator receiver modulated diguanylate cyclase
RBG_16_NSX_64_22_RBG_16_scaffold_6829_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(22753..24633)
DNA (1881bp) protein (627aa)
histidine kinase (EC:2.7.3.-); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] id=16980375 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
histidine kinase Tax=RBG_16_Nitrospirae_64_22_curated
histidine kinase
RBG_16_NSX_64_22_RBG_16_scaffold_6829_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(24626..25540)
DNA (915bp) protein (305aa)
phosphate binding protein; K02040 phosphate transport system substrate-binding protein Tax=RBG_16_Nitrospirae_64_22_curated
ABC-type phosphate transport system periplasmic component-like protein id=3755559 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
phosphate binding protein
RBG_16_NSX_64_22_RBG_16_scaffold_6829_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

25896..26933
DNA (1038bp) protein (346aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RBG_16_Nitrospirae_64_22_curated
DNA polymerase III, delta prime subunit id=4948302 bin=GWC2_Nitrospirae_57_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
DNA polymerase III subunit delta'
RBG_16_NSX_64_22_RBG_16_scaffold_6829_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists


27806..29404
DNA (1599bp) protein (533aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Nitrospirae_64_22_curated
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PH89_9BACT
RBG_16_NSX_64_22_RBG_16_scaffold_6829_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

29401..30780
DNA (1380bp) protein (460aa)
Zn-dependent protease Tax=RBG_16_Nitrospirae_64_22_curated
Putative Zn-dependent protease, involved in pqq synthesis (PpqF) id=3674206 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Zn-dependent protease
RBG_16_NSX_64_22_RBG_16_scaffold_6829_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

30773..32113
DNA (1341bp) protein (447aa)
putative M16 family Zn-dependent peptidase (EC:3.4.24.-) Tax=RBG_16_Nitrospirae_64_22_curated
putative M16 family Zn-dependent peptidase (EC:3.4.24.-)
Processing peptidase id=1880561 bin=GWD2_Nitrospirae-related_57_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RBG_16_NSX_64_22_RBG_16_scaffold_6829_25
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

32904..33194
DNA (291bp) protein (97aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_6829_26
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

33191..34165
DNA (975bp) protein (325aa)
id=4450595 Tax=RBG_16_Nitrospirae_64_22_curated
id=4450595 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RBG_16_NSX_64_22_RBG_16_scaffold_6829_27
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

34162..34530
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUD8_HALO1
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_6829_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

34543..35013
DNA (471bp) protein (157aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2S8_CONWI
Crp/Fnr family transcriptional regulator Tax=RBG_16_Nitrospirae_64_22_curated
Crp/Fnr family transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_6829_29
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

35193..36254
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE7_9BACT
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_6829_30
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

36324..37589
DNA (1266bp) protein (422aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RBG_16_Nitrospirae_64_22_curated
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAF8_9BACT
Displaying items 1-30 of 42 in total

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