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RBG_16_NSX_64_22_RBG_16_scaffold_8212

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_NSX_64_22_RBG_16_scaffold_8212_1
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(3..161)
DNA (159bp) protein (53aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_8212_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(166..621)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034A5C00
PilT protein domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
PilT protein domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_8212_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(618..866)
DNA (249bp) protein (83aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
RBG_16_NSX_64_22_RBG_16_scaffold_8212_4
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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1092..1373
DNA (282bp) protein (94aa)
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RBG_16_Nitrospirae_64_22_curated
Plasmid maintenance system killer id=3729146 bin=GWC2_Syntrophus__56_31 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
plasmid maintenance system killer protein
RBG_16_NSX_64_22_RBG_16_scaffold_8212_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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1383..1682
DNA (300bp) protein (100aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7A6_GEODF
XRE family transcriptional regulator Tax=RBG_16_Nitrospirae_64_22_curated
XRE family transcriptional regulator
RBG_16_NSX_64_22_RBG_16_scaffold_8212_6
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(1742..2143)
DNA (402bp) protein (134aa)
putative nucleic-acid-binding protein, contains PIN domain Tax=RBG_16_Nitrospirae_64_22_curated
Uncharacterized protein id=2049233 bin=GWD2_Nitrospirae-related_57_8 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
putative nucleic-acid-binding protein, contains PIN domain
RBG_16_NSX_64_22_RBG_16_scaffold_8212_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2115..2369)
DNA (255bp) protein (85aa)
hypothetical protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=2049231 bin=GWD2_Nitrospirae-related_57_8 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
transcriptional regulator, AbrB family
RBG_16_NSX_64_22_RBG_16_scaffold_8212_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(2814..3185)
DNA (372bp) protein (124aa)
Helix-turn-helix domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8G1_GEOUR
helix-turn-helix domain-containing protein Tax=RBG_16_Nitrospirae_64_22_curated
helix-turn-helix domain-containing protein
RBG_16_NSX_64_22_RBG_16_scaffold_8212_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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3308..5293
DNA (1986bp) protein (662aa)
penicillin-binding protein 1 Tax=RBG_16_Nitrospirae_64_22_curated
Multimodular transpeptidase-transglycosylase id=4189553 bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
penicillin-binding protein 1
RBG_16_NSX_64_22_RBG_16_scaffold_8212_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

5438..6016
DNA (579bp) protein (193aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_8212_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

5985..6413
DNA (429bp) protein (143aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_8212_12
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

6397..8016
DNA (1620bp) protein (540aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RBG_16_Nitrospirae_64_22_curated
Apolipoprotein N-acyltransferase id=4511043 bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
lnt; apolipoprotein N-acyltransferase
RBG_16_NSX_64_22_RBG_16_scaffold_8212_13
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

8026..9147
DNA (1122bp) protein (374aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RBG_16_Nitrospirae_64_22_curated
Peptide chain release factor 2 id=4511042 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
prfB; peptide chain release factor 2
RBG_16_NSX_64_22_RBG_16_scaffold_8212_14
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(9304..9771)
DNA (468bp) protein (156aa)
putative inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RBG_16_Nitrospirae_64_22_curated
Myo-inositol-1(Or 4)-monophosphatase id=3637663 bin=GWC2_Deltaproteobacteria_42_51 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
inositol monophosphatase
RBG_16_NSX_64_22_RBG_16_scaffold_8212_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10207..10452)
DNA (246bp) protein (82aa)
Tax=RBG_16_Nitrospirae_64_22_curated
RBG_16_NSX_64_22_RBG_16_scaffold_8212_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

10799..11239
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=RBG_16_Nitrospirae_64_22_curated
Putative uncharacterized protein id=4576629 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RBG_16_NSX_64_22_RBG_16_scaffold_8212_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

11236..12081
DNA (846bp) protein (282aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Nitrospirae_64_22_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=2 Tax=Moorella thermoacetica RepID=PYRF_MOOTA
RBG_16_NSX_64_22_RBG_16_scaffold_8212_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12078..12671
DNA (594bp) protein (198aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10) Tax=RBG_16_Nitrospirae_64_22_curated
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=4878506 bin=GWC2_Nitrospirae-rel_56_14 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RBG_16_NSX_64_22_RBG_16_scaffold_8212_19
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

12701..14230
DNA (1530bp) protein (510aa)
pabB; aminodeoxychorismate synthase component I (EC:2.6.1.85); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85] Tax=RBG_16_Nitrospirae_64_22_curated
pabB; aminodeoxychorismate synthase component I (EC:2.6.1.85)
Anthranilate synthase id=4948296 bin=GWC2_Nitrospirae_57_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_8212_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

14874..16361
DNA (1488bp) protein (496aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RBG_16_Nitrospirae_64_22_curated
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=4139377 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
RBG_16_NSX_64_22_RBG_16_scaffold_8212_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

16358..17794
DNA (1437bp) protein (479aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4G9_GEOLS
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein Tax=RBG_16_Nitrospirae_64_22_curated
lipoprotein releasing system transmembrane protein LolC/E family
RBG_16_NSX_64_22_RBG_16_scaffold_8212_22
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

17791..18486
DNA (696bp) protein (232aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Nitrospirae_64_22_curated
lolD; lipoprotein-releasing system ABC transporter ATP-binding protein lolD id=14429936 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ABC transporter
RBG_16_NSX_64_22_RBG_16_scaffold_8212_trna_1
unknown

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18904..18976
DNA (73bp)
transferRNA
RBG_16_NSX_64_22_RBG_16_scaffold_8212_23
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

19069..21012
DNA (1944bp) protein (648aa)
PAS domain S-box Tax=RBG_16_Nitrospirae_64_22_curated
PAS domain S-box id=4744314 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PAS domain S-box
Displaying 24 items

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