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RBG_16_NSX_64_22_RBG_16_scaffold_2885_24

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(23922..24350)

Top 3 Functional Annotations

Value Algorithm Source
OstA-like protein; K09774 lipopolysaccharide export system protein LptA Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 142.0
  • Bit_score: 278
  • Evalue 6.30e-72
Lipopolysaccharide transport periplasmic protein LptA id=4810649 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 84.0
  • Bit_score: 75
  • Evalue 5.80e-11
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 83.0
  • Bit_score: 74
  • Evalue 2.10e-11

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 429
ATGGAGGACCGCGTGACGCGGATCGAGGCCGAGGGGGGCGTCCGGATGGTCCAGGACGGGCGGCGCGCCGTCGCCGACCGGGCCGTCTACGAACGGGCGGAGGAGAAAGTCGTGCTTACCGGGAACCCGAAGGTCTGGGAGGACAAGAACGTCGTCTCCGGTCGGGAGATCACCGTTTTCCTGGACGAAGACCGGAGCGAGGTCAAGGAGGACGTCCGCGTCATCCTCTACCCGCGCGACGAAGAGAAGCCTTCCGAGACGCCCAAGAAGCCCCGCTCCAGCGAGAAAAAGAAAGTCCCCCTGGTCGTAACGTCCCGGTCGATGACCGCGGATCAGACGAAAAGCCAGATCATCTTCGAGAACGACGTCGTCGTCCGGCGGAGCGACATGACGCTGACCGCTGACCGAGTGACGGTGTTCTACGAATAG
PROTEIN sequence
Length: 143
MEDRVTRIEAEGGVRMVQDGRRAVADRAVYERAEEKVVLTGNPKVWEDKNVVSGREITVFLDEDRSEVKEDVRVILYPRDEEKPSETPKKPRSSEKKKVPLVVTSRSMTADQTKSQIIFENDVVVRRSDMTLTADRVTVFYE*