ggKbase home page

RBG_16_NSX_64_22_RBG_16_scaffold_2885_36

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(35131..35970)

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 553
  • Evalue 2.00e-154
2-dehydro-3-deoxyphosphooctonate aldolase id=4527157 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 274.0
  • Bit_score: 356
  • Evalue 3.30e-95
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 268.0
  • Bit_score: 354
  • Evalue 2.70e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 840
TTGATCCCGGTCGCGCCGGTCGCTTGCGGGTCCGTCGTCGTGGGCGGGGGCGGTCCCCTGGCGCTGATCGCCGGTCCGTGCGTGATCGAGAGCGAAGAGCACGCCTGGCGGATGGCCGGGCGCCTCAAGGAGACGGCGGAGCGGGAAGGGTTCCCGTTCATCTTCAAGGCTTCCTACGACAAGGCGAACCGCTCGTCGATCCGCTCGTTCCGGGGCCCGGGACTCGCGGAGGGACTGCGGATCCTCGGGCGGATCCGCGAGGGACTCGGCGTTCCCGTCCTGTCGGACGTCCACCGGTTCGAGGAGATCGGGCCGGCGGCGGCCGTCCTGGACGTCATCCAGGTCCCCGCGTTCCTCTGCCGGCAGACCGATTTCCTTCTGGAGGCGGCCCGGACGGGCCGGACCGTCAACGTCAAGAAGGGACAGTTCATGGCCCCCTGGGACATCGGAAACGTCGTGGAGAAGATCGCGTCGACGGGAAACGGAAAGATCCTCCTGACGGAGCGCGGGGCGTCGTTCGGCTACAACAACCTCGTGGCGGACATGCGGTCGCTGGTCGTCCTCCGTCGGACGGGATATCCCGTCGTGTTCGACGCGACGCACTCGGTCCAGCTCCCCGGCGGGGCCGGGGACCGCTCGGCGGGCGACCGCGAGTTCGCCGCGCCTCTGGCGCGGGCGGCGGCGGCCGTGGGGATCGACGCGCTCTTCCTCGAAGTTCACGACGATCCGGACCAGGCCCTGTCCGACGGTCCCAACATGGTCCGCCTCGACCGGCTCCCTTTCCTGCTGAGAGAGGTTCGCGCCGTTGACAAGGCCTTGCGGGAGGTCTCATGTCCCTGA
PROTEIN sequence
Length: 280
LIPVAPVACGSVVVGGGGPLALIAGPCVIESEEHAWRMAGRLKETAEREGFPFIFKASYDKANRSSIRSFRGPGLAEGLRILGRIREGLGVPVLSDVHRFEEIGPAAAVLDVIQVPAFLCRQTDFLLEAARTGRTVNVKKGQFMAPWDIGNVVEKIASTGNGKILLTERGASFGYNNLVADMRSLVVLRRTGYPVVFDATHSVQLPGGAGDRSAGDREFAAPLARAAAAVGIDALFLEVHDDPDQALSDGPNMVRLDRLPFLLREVRAVDKALREVSCP*