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RBG_16_NSX_64_22_RBG_16_scaffold_4265_23

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(20665..20865)

Top 3 Functional Annotations

Value Algorithm Source
cold shock DNA/RNA-binding protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 138
  • Evalue 3.60e-30
Cold-shock DNA-binding protein family id=2244465 bin=GWB2_Proteobacteria_55_19 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 67.0
  • Bit_score: 116
  • Evalue 1.10e-23
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 66.0
  • Bit_score: 115
  • Evalue 5.10e-24

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 201
ATGGCAAGAGGAACCGTTAAGTGGTTCAATGACGCGAAAGGGTTCGGCTTCATCGCCCAGGAAGAGGGCAAGGATGTTTTTGTCCACTTTTCCGCGATCGAGGGTGATGGGTTCAAGACCCTCGCCGAAGGAGATTCGGTGGAGTTCGAAGTGACCCAGGGCCCGAAGGGGCCGCAGGCGTCCAACGTACGAAAGGTCTAG
PROTEIN sequence
Length: 67
MARGTVKWFNDAKGFGFIAQEEGKDVFVHFSAIEGDGFKTLAEGDSVEFEVTQGPKGPQASNVRKV*