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RBG_16_NSX_64_22_RBG_16_scaffold_2378_7

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(6325..6861)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG7_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 173.0
  • Bit_score: 175
  • Evalue 3.90e-41
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 352
  • Evalue 2.50e-94
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 173.0
  • Bit_score: 175
  • Evalue 1.10e-41

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 537
GTGCACCTGGGGCCGCTCTACCGGACGGCGCTTCGTCTCACGGGGAACGATGCCGATGCCCAGGATCTCGTTCAGGAGACGGTCCTCCGGGCGTTCCGCTTCTTCGATTCTTTCGAGCCGGGGACGAACTGCCGGGCCTGGCTCTTCCGAATCCTCATGAACACGTTCGTGAACGAGTACCGGAAGCGCGTTCGCGGGCCCCAGCAGGTGGATTTGGACGAGACGACGATGGGTACGCTGGAAAGCCGGGCTGACCAGGCGATCGTGTCTCTTCCGGCGACGCCGGAGGAAGTGGTTTCCGCCGGGATGCTGGACGGCGACCTGAAGGAAGGACTCCGGGCGCTTCCACCGGAGTTCCGGGCGGCCGTTCTTCTGTGCGACGTGGAAGAGTTCTCGTATAAGGAGATCGCCGAGATGACGCAGGTCCCGGTCGGGACGGTCATGTCCCGGATTCACCGGGGCCGGCGCGCCCTGCGCGAGTTCCTTCTCAGGCGCAGGCGGGCGAAGCCGGTCCGCGCTCTCTCGGCGGGCGCGTGA
PROTEIN sequence
Length: 179
VHLGPLYRTALRLTGNDADAQDLVQETVLRAFRFFDSFEPGTNCRAWLFRILMNTFVNEYRKRVRGPQQVDLDETTMGTLESRADQAIVSLPATPEEVVSAGMLDGDLKEGLRALPPEFRAAVLLCDVEEFSYKEIAEMTQVPVGTVMSRIHRGRRALREFLLRRRRAKPVRALSAGA*