ggKbase home page

RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_1
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1..1020)
DNA (1020bp) protein (340aa)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MKM3_9BACT
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_2
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1022..1405)
DNA (384bp) protein (128aa)
Response regulator receiver protein n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B7A1_DESCC
response regulator receiver protein; K02490 two-component system, response regulator, stage 0 sporulation protein F Tax=RBG_16_Zixibacteria_43_9_curated
response regulator receiver protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_3
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1407..1793)
DNA (387bp) protein (129aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Zixibacteria_43_9_curated
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Sigma-54-dependent transcriptional response regulator PilR id=4686863 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_4
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(1814..3112)
DNA (1299bp) protein (433aa)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IQB3_9PLAN
HAMP domain-containing sensor histidine kinase Tax=RBG_16_Zixibacteria_43_9_curated
HAMP domain-containing sensor histidine kinase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_5
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(3281..3847)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NS60_9DELT
Uncharacterized protein Tax=RBG_16_Zixibacteria_43_9_curated
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_6
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(3908..5881)
DNA (1974bp) protein (658aa)
outer membrane receptor for ferrienterochelin and colicins Tax=RBG_16_Zixibacteria_43_9_curated
TonB-dependent receptor id=3018610 bin=GWF2_Syntrophobacterales_56_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
outer membrane receptor for ferrienterochelin and colicins
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_7
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

6023..8188
DNA (2166bp) protein (722aa)
Peptidase S46 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRX1_9BACT
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_8
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(8290..8511)
DNA (222bp) protein (74aa)
Tax=RBG_16_Zixibacteria_43_9_curated
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_9
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

9853..10701
DNA (849bp) protein (283aa)
modification methylase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B79C47
DNA methylase N-4/N-6 domain-containing protein Tax=RBG_16_Zixibacteria_43_9_curated
Site-specific DNA-methyltransferase Adenine-specific
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_10
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

10695..11396
DNA (702bp) protein (234aa)
DNA modification methylase (EC:2.1.1.72) Tax=RBG_16_Zixibacteria_43_9_curated
DNA modification methylase (EC:2.1.1.72)
DNA modification methylase n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RXI0_CENSY
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_11
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(11391..12395)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T3CF58_CLODI
Uncharacterized protein Tax=RBG_16_Zixibacteria_43_9_curated
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_12
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

12689..13675
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003760783
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_13
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

13790..14347
DNA (558bp) protein (186aa)
Transposase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N6T9_9BACT
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_14
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

14669..15004
DNA (336bp) protein (112aa)
response regulator SirA n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E30195
SirA-like protein Tax=RBG_16_Zixibacteria_43_9_curated
SirA-like protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_15
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

15347..15940
DNA (594bp) protein (198aa)
UbiE/COQ5 methyltransferase Tax=RBG_16_Zixibacteria_43_9_curated
UbiE/COQ5 methyltransferase id=1912004 bin=GWA2_Elusimicrobia_69_24 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
UbiE/COQ5 methyltransferase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_16
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

15937..16458
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=2 Tax=unclassified Eubacteriaceae RepID=G9X024_9FIRM
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_17
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

16619..18604
DNA (1986bp) protein (662aa)
Histidine kinase (EC:2.7.13.3) Tax=RBG_16_Zixibacteria_43_9_curated
Histidine kinase (EC:2.7.13.3)
GAF sensor hybrid histidine kinase id=1250979 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_18
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

18829..19479
DNA (651bp) protein (217aa)
thymidylate synthase (fad) (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=RBG_16_Zixibacteria_43_9_curated
thymidylate synthase (fad) (EC:2.1.1.148)
Thymidylate synthase ThyX id=4471390 bin=GWF2_Planctomycetes_42_9 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_19
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

19463..21664
DNA (2202bp) protein (734aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RBG_16_Zixibacteria_43_9_curated
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHG0_THEYD
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_20
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

21759..22373
DNA (615bp) protein (205aa)
id=1249696 Tax=RBG_16_Zixibacteria_43_9_curated
id=1249696 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_21
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

22366..23115
DNA (750bp) protein (250aa)
id=1249695 Tax=RBG_16_Zixibacteria_43_9_curated
id=1249695 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_22
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

23489..23857
DNA (369bp) protein (123aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_16_Zixibacteria_43_9_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QT92_ACEAZ
holo-acyl-carrier-protein synthase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_23
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

24161..24736
DNA (576bp) protein (192aa)
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RBG_16_Zixibacteria_43_9_curated
Orotate phosphoribosyltransferase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHL2_9BACT
pyrE; orotate phosphoribosyltransferase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_24
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(24742..24903)
DNA (162bp) protein (54aa)
Tax=RBG_16_Zixibacteria_43_9_curated
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_25
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(24863..25651)
DNA (789bp) protein (263aa)
Tax=RBG_16_Zixibacteria_43_9_curated
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_1694_26
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(25688..26434)
DNA (747bp) protein (249aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein id=1250091 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Displaying 26 items

View Taxonomy