ggKbase home page

RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_1
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

1..99
-----------------
DNA (99bp)
protein (33aa)
Tax=RBG_16_Zixibacteria_43_9_curated
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_2
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

1385..2149
-----------------
DNA (765bp)
protein (255aa)
rfbB-3; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_16_Zixibacteria_43_9_curated
rfbB-3; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=2 Tax=Archaea RepID=Q0W8M9_UNCMA
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_3
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

2137..2850
-----------------
DNA (714bp)
protein (238aa)
nucleotidyltransferase Tax=RBG_16_Zixibacteria_43_9_curated
nucleotidyl transferase id=1242738 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
nucleotidyltransferase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_4
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

4008..4478
-----------------
DNA (471bp)
protein (157aa)
gmhA; sedoheptulose 7-phosphate isomerase (EC:5.3.1.-); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Zixibacteria_43_9_curated
gmhA; sedoheptulose 7-phosphate isomerase (EC:5.3.1.-)
Sedoheptulose 7-phosphate isomerase n=1 Tax=uncultured bacterium RepID=K2DUQ4_9BACT
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_5
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

4471..5100
-----------------
DNA (630bp)
protein (210aa)
Probable transaldolase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=TAL_FERNB id=1242736 bin=RBG2 species=Fervidobacterium nodosum genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG2 organism_group=Chloroflexi
D,D-heptose 1,7-bisphosphate phosphatase Tax=RBG_16_Zixibacteria_43_9_curated
D,D-heptose 1,7-bisphosphate phosphatase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_6
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

5075..5797
-----------------
DNA (723bp)
protein (241aa)
Probable transaldolase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=TAL_FERNB id=1242736 bin=RBG2 species=Fervidobacterium nodosum genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG2 organism_group=Chloroflexi
transaldolase Tax=RBG_16_Zixibacteria_43_9_curated
transaldolase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_7
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

5794..6894
-----------------
DNA (1101bp)
protein (367aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K683_9FIRM id=5223571 bin=16ft_combo_ws3_JS1 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
group 1 glycosyl transferase Tax=RBG_16_Zixibacteria_43_9_curated
group 1 glycosyl transferase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_8
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

6896..8452
-----------------
DNA (1557bp)
protein (519aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein id=1251284 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_9
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

8454..9851
-----------------
DNA (1398bp)
protein (466aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=RBG_16_Zixibacteria_43_9_curated
Similar to glucosyl-1-phosphate transferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q7K9_9BACT
undecaprenyl-phosphate galactose phosphotransferase
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_10
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

10086..11786
-----------------
DNA (1701bp)
protein (567aa)
Uncharacterized protein Tax=RBG_16_Zixibacteria_43_9_curated
Uncharacterized protein id=1249720 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_11
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

12134..12727
-----------------
DNA (594bp)
protein (198aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RBG_16_Zixibacteria_43_9_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=1249692 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_12
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists


12739..13092
-----------------
DNA (354bp)
protein (118aa)
30S ribosomal protein S6 Tax=RBG_16_Zixibacteria_43_9_curated
30S ribosomal protein S6 id=3957120 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
30S ribosomal protein S6
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_13
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

13126..13569
-----------------
DNA (444bp)
protein (148aa)
ssb; ssDNA-binding protein; K03111 single-strand DNA-binding protein Tax=RBG_16_Zixibacteria_43_9_curated
Single-stranded DNA-binding protein id=1249690 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
ssb; ssDNA-binding protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_14
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists


13590..13826
-----------------
DNA (237bp)
protein (79aa)
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RBG_16_Zixibacteria_43_9_curated
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=1249689 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
30S ribosomal protein S18
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_15
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists


13840..14292
-----------------
DNA (453bp)
protein (151aa)
50S ribosomal protein L9 n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHK8_9BACT
50S ribosomal protein L9 Tax=RBG_16_Zixibacteria_43_9_curated
50S ribosomal protein L9
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_16
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

14334..14819
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
Uncharacterized protein id=1249687 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_17
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

14855..15679
-----------------
DNA (825bp)
protein (275aa)
NAD synthase; K06864 uncharacterized protein Tax=RBG_16_Zixibacteria_43_9_curated
ExsB family protein; K06864 uncharacterized protein id=1249686 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_18
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

15683..15901
-----------------
DNA (219bp)
protein (73aa)
id=1249685 Tax=RBG_16_Zixibacteria_43_9_curated
id=1249685 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_19
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

15902..16336
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
Putative uncharacterized protein id=1249684 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_20
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

16337..16747
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
Putative uncharacterized protein id=1249683 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_21
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

17012..18874
-----------------
DNA (1863bp)
protein (621aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
Uncharacterized protein id=1249680 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
RBG_16_Zixibacteria_43_9_RBG_16_scaffold_4424_22
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

18982..20109
-----------------
DNA (1128bp)
protein (376aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
Uncharacterized protein id=1249678 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Displaying 22 items

View Taxonomy