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RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_1
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..649)
DNA (648bp) protein (216aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase id=4409887 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_2
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(653..1549)
DNA (897bp) protein (299aa)
cytoplasmic protein Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Hypothetical cytosolic protein id=4409888 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_3
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1832..2476
DNA (645bp) protein (215aa)
phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Predicted phosphatase id=2550800 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphatase
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_4
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2526..3944
DNA (1419bp) protein (473aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
tRNA(Ile)-lysidine synthase id=3900860 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
tRNA(Ile)-lysidine synthetase
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_5
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4212..6077
DNA (1866bp) protein (622aa)
cell division protein (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
cell division protein (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH id=2550806 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_6
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6375..7571
DNA (1197bp) protein (399aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase id=4425064 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_7
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7587..8081
DNA (495bp) protein (165aa)
ATP/GTP hydrolase; K06925 UPF0079 ATP-binding protein Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
ATP/GTP hydrolase id=2550814 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
ATP/GTP hydrolase
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_8
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8304..9299
DNA (996bp) protein (332aa)
aspartokinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
aspartokinase (EC:2.7.2.4)
Aspartokinase id=2550817 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_9
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9300..9869
DNA (570bp) protein (190aa)
competence protein ComEA; K02237 competence protein ComEA Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
DNA-binding protein, ComEA family id=2550820 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
competence protein ComEA
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_10
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9975..10583)
DNA (609bp) protein (203aa)
soluble lytic murein transglycosylase (EC:3.2.1.-); K01238 [EC:3.2.1.-] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
soluble lytic murein transglycosylase (EC:3.2.1.-)
Soluble lytic murein transglycosylase id=2550824 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_11
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10610..10855
DNA (246bp) protein (82aa)
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_trna_1
unknown

Not on your lists

10893..10966
DNA (74bp)
transferRNA
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_trna_2
unknown

Not on your lists

11085..11168
DNA (84bp)
transferRNA
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_12
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11437..12771
DNA (1335bp) protein (445aa)
trigger factor, PPIase (EC:5.2.1.8); K03545 trigger factor Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
trigger factor, PPIase (EC:5.2.1.8)
Trigger factor id=4425075 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_13
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12768..13352
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=4425077 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_14
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13489..14748
DNA (1260bp) protein (420aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
ATP-dependent Clp protease ATP-binding subunit ClpX id=4425078 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
clpX; ATP-dependent protease ATP-binding subunit ClpX
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_15
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14780..17266
DNA (2487bp) protein (829aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
ATP-dependent protease La (EC:3.4.21.53)
Lon protease id=2551032 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_trna_3
unknown

Not on your lists

17316..17388
DNA (73bp)
transferRNA
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_16
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17370..17540)
DNA (171bp) protein (57aa)
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_trna_4
unknown

Not on your lists

17475..17548
DNA (74bp)
transferRNA
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_17
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17565..19223
DNA (1659bp) protein (553aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-); K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase id=2551039 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_18
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19322..20293
DNA (972bp) protein (324aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Bacterial peptide Chain Release Factor 2 (RF-2) id=2807125 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
peptide chain release factor 2
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_19
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20426..22513
DNA (2088bp) protein (696aa)
membrane-bound lytic murein transglycosylase D (EC:3.2.1.-); K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
membrane-bound lytic murein transglycosylase D (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase D id=2807130 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_20
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22524..22976)
DNA (453bp) protein (151aa)
metal-dependent hydrolase; K07042 probable rRNA maturation factor Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Probable rRNA maturation factor id=2807134 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
metal-dependent hydrolase
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_21
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23032..24036)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XAS7_9BACT
phoH protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
phoH protein
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_22
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24097..25515)
DNA (1419bp) protein (473aa)
diaminopimelate aminotransferase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
diaminopimelate aminotransferase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase id=2807144 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_23
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25536..26954)
DNA (1419bp) protein (473aa)
Zn-dependent peptidase Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Predicted Zn-dependent peptidase id=2551062 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Zn-dependent peptidase
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_24
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26951..27175)
DNA (225bp) protein (75aa)
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_25
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27329..28825)
DNA (1497bp) protein (499aa)
M16 family peptidase Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Peptidase, M16 family id=2551066 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
M16 family peptidase
RBG_19FT_COMBO_Syntrophobacterales_59_10_rbg_19ft_combo_scaffold_1313_26
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28815..29051)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XMZ4_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
hypothetical protein
Displaying items 1-30 of 54 in total

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