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RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_1
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(437..1030)
DNA (594bp) protein (198aa)
RNA polymerase sigma factor Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RNA polymerase sigma factor id=1750195 bin=GWE2_RBX1_39_32 species=Eubacterium ventriosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_2
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(1033..1242)
DNA (210bp) protein (70aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_3
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(1217..1480)
DNA (264bp) protein (88aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_4
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(1526..3574)
DNA (2049bp) protein (683aa)
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Flagellar biosynthesis protein FlhA id=1750193 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar biosynthesis protein FlhA
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_5
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(3595..4698)
DNA (1104bp) protein (368aa)
flagellar biosynthesis/type III secretory pathway protein; K02401 flagellar biosynthetic protein FlhB Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Flagellar biosynthetic protein FlhB id=1750192 bin=GWE2_RBX1_39_32 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar biosynthesis/type III secretory pathway protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_6
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(4795..5568)
DNA (774bp) protein (258aa)
flagellar biosynthetic protein FliR Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Flagellar biosynthetic protein fliR id=3937477 bin=GWF2_OP9_related_35_9 species=Selenomonas infelix genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
flagellar biosynthetic protein FliR
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_7
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(5565..5834)
DNA (270bp) protein (90aa)
fliQ; flagellar biosynthesis protein, protein export component FliQ Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Flagellar biosynthesis protein FliQ id=1808609 bin=GWD2_RBX1-related_39_127 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
fliQ; flagellar biosynthesis protein, protein export component FliQ
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_8
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(5831..6517)
DNA (687bp) protein (229aa)
Flagellar biosynthesis pathway, component FliP n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0I2_PELTS
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
fliP; flagellar biosynthesis protein FliP
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_9
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(6514..6798)
DNA (285bp) protein (95aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_10
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(6795..7085)
DNA (291bp) protein (97aa)
CheC, inhibitor of MCP methylation / FliN fusion protein; K02417 flagellar motor switch protein FliN/FliY Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
CheC, inhibitor of MCP methylation / FliN fusion protein id=1750186 bin=GWE2_RBX1_39_32 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheC, inhibitor of MCP methylation / FliN fusion protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_11
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(7107..8258)
DNA (1152bp) protein (384aa)
Flagellar motor switch protein FliM n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1THN9_9CLOT
flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
flagellar motor switch protein FliM
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_12
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(8271..9095)
DNA (825bp) protein (275aa)
fagellar hook-basal body protein; K02390 flagellar hook protein FlgE Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Fagellar hook-basal body protein id=3524840 bin=GWF2_OP9_related_35_9 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
fagellar hook-basal body protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_13
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(9088..9843)
DNA (756bp) protein (252aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_14
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(10015..11238)
DNA (1224bp) protein (408aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=6 Tax=Clostridium thermocellum RepID=A3DE30_CLOTH
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_15
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

11299..12684
DNA (1386bp) protein (462aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_16
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

12720..14777
DNA (2058bp) protein (686aa)
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XPJ7_9CLOT
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_17
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(14778..16022)
DNA (1245bp) protein (415aa)
transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Transcription termination factor Rho id=1756421 bin=GWD2_RBX1-related_39_127 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
transcription termination factor Rho
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_18
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

16291..16536
DNA (246bp) protein (82aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1B0_SPHS2
excinuclease ABC subunit C; K07461 putative endonuclease Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
excinuclease ABC subunit C
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_19
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(16656..16769)
DNA (114bp) protein (38aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_7440_20
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(17082..18311)
DNA (1230bp) protein (410aa)
cell wall binding repeat 2-containing protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D8E6
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
Displaying 20 items

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