ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_2052_15

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 13143..14936

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 597.0
  • Bit_score: 1164
  • Evalue 0.0
Type IV secretory pathway VirB4 components-like protein id=2934300 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 597.0
  • Bit_score: 780
  • Evalue 9.00e-223
Type IV secretory pathway VirB4 components-like protein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 593.0
  • Bit_score: 593
  • Evalue 5.70e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1794
ATGATGAAATTATTCAAAAAACGCTCCCAAAAAATAACTCAAGAAGAAATCCCAGCCAAAGAGACTTCTGTTATTGACCTTATTTCCCCGGCCGGTTTAAAAATCGGCTCCAATGAACTGCAAATTGAAGAAAAATACTGCCGGACGATTTTTATTTTTACCTATCCCCGGGTCTTGGCCACCGGCTGGTTTTCGCCGATTATTACTTTAGACCGAGAAATGAATATCTCAATGTTTATTCATCCGGCTGAAACCGGCTTGGTCTTAAAAAATTTAGAAAAAAAGACAGCCCAGGTCTCATCGCAAATAACTCTTCAGCAGGAAAAAGGCAAAGTCAGGGACCCGGTCTTGGAAACCGCGCTCAAAGACATTGAAGAATTAAGAGACCGGCTTCAGCAGGGCACGGAACGGCTTTTTAAATTCGGTCTTTATATTACTTTTTTCGCTGACTCGCCTGAAAAACTAAATGAAATTGAAAATGAAATCAGAGCGCTTCTTGAAACAAAAATGGTTTACGCCAAGCCGGCTGTTTTCCAACAAGAGCAGGGCTTTATTTCCACCCTCCCCTTAGAAGAAGACAAGCTCCTGATTCATAATAGCTTTAATACTACTCCCCTCTCTTTGTCCTTCCCTTTTATCTCATCCGATTTATCTGATAATAAGGGCGTGCTTTACGGCATCAACCGGCATAATAATTCTTTGATTTTATTTGACCGATTTAGCTTGGAGAATCCGAACTTTTGTTTATTCGGTGTCTCCGGCGGAGGCAAAAGCTATTTTGTCAAACTGGAAGTTCTTCGTTCTTTAATGCAAGGAACCGAAGTCATCATCATTGACCCGGAAAAAGAATATAAATATCTGGCCGAAACAGTCGGCGGCAGTTTTATTGATATTTCTTTAAGCTCCCCCCACCATCTCAATCCTTTTGATTTGCCTCTGGTCGGCCAGGATGAAAATCCGGCTGACGCTTTCAGAAGTAATATTATCAATCTGGTCGGGCTGTTTAGAATAATGCTTGGCGGTTTGACGCCCGAAGAAGACGCCATTATGGATAAAGCCATTGCTGAAACTTACGCTTCCAGAGACATTACAGCGGAATCGGATTTTTCCAAAATCACGCCGCCTCTGATGTCAGACCTTTACACGGTTTTAAAAAGCATTATTGGCGGCGAAAAATTAGCAATCCGCTTGGAAAAATACGTCAGCGGCAGTTACGCCGGATTTTTCAACCAGCCGACCAATGTTCAATTAAAAAAGAAATTAGTGGTTTTTAGCATCCGCGATCTGGAAGAAGAATTAAGGCCTTTGGCGATGTTTGTCATCCTCCGTTATGTCTGGAATATCATCCGCTCTGAATTGAAAAAAAGAATTTTGGTGGTTGACGAGGCCTGGTGGATGATGCGATATGAAGACGGCGCTTCTTTTCTTTTCGGCATCGCCAAAAGAGCCAGAAAATATTACCTGGGGCTAACAACCATCACTCAAGACATAGCCGACTTTATGAAGTCAAAATACGGCAAGCCGATTGTGACCAATTCGTCGCTTCAGCTTTTGATGAAGCAATCGCCGGCCACTATTGAAGTGGTCAAAGAGACCTTTAATTTAACCGAGCAGGAAAAATATATGCTTTTGGAATCCAGCGTCGGCGAAGGCATTTTCTTTGCCGGCTTAAAGCATGTGGCGATTAAAGTGGTCGCCTCTTATACCGAAGACCAGATTATTACCACTGACCCGGCCCAATTATTGGCCATAGAAAAAGCTAAAGAAGAGCTGGCGAGAGAGGAAGGAAAATAA
PROTEIN sequence
Length: 598
MMKLFKKRSQKITQEEIPAKETSVIDLISPAGLKIGSNELQIEEKYCRTIFIFTYPRVLATGWFSPIITLDREMNISMFIHPAETGLVLKNLEKKTAQVSSQITLQQEKGKVRDPVLETALKDIEELRDRLQQGTERLFKFGLYITFFADSPEKLNEIENEIRALLETKMVYAKPAVFQQEQGFISTLPLEEDKLLIHNSFNTTPLSLSFPFISSDLSDNKGVLYGINRHNNSLILFDRFSLENPNFCLFGVSGGGKSYFVKLEVLRSLMQGTEVIIIDPEKEYKYLAETVGGSFIDISLSSPHHLNPFDLPLVGQDENPADAFRSNIINLVGLFRIMLGGLTPEEDAIMDKAIAETYASRDITAESDFSKITPPLMSDLYTVLKSIIGGEKLAIRLEKYVSGSYAGFFNQPTNVQLKKKLVVFSIRDLEEELRPLAMFVILRYVWNIIRSELKKRILVVDEAWWMMRYEDGASFLFGIAKRARKYYLGLTTITQDIADFMKSKYGKPIVTNSSLQLLMKQSPATIEVVKETFNLTEQEKYMLLESSVGEGIFFAGLKHVAIKVVASYTEDQIITTDPAQLLAIEKAKEELAREEGK*