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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_3

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(2845..3465)

Top 3 Functional Annotations

Value Algorithm Source
rpfA; 30S ribosomal protein S1 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 395
  • Evalue 3.90e-107
RNA binding S1 domain protein id=2933970 bin=GWC1_OD1_38_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 187.0
  • Bit_score: 187
  • Evalue 1.50e-44
30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 205.0
  • Bit_score: 138
  • Evalue 3.00e-30

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Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGTTTAAAAAAGCTAAAAGTCAATTTTTGCCGTCCCTAAAAAAAGAATCAAATTTGAAAGCCATGAAAGAACTTCTGACCGCCAAAGGCGAAGCGGCGCCCCAACTGCCTCAAGCCGGAGAGCTTATAGACGGCCGCATTATTGAATTAAGCAAACACTCTCTTATTTTAGATTTGGGAGCTTCGGGCACCGGCATTGTCTACGGCGCTGAACTAAAAGAAAATAAAGAGCTTTTGAAAGGACTGAAAATCAATGACATTGTTTCGGTCTTGGTTTTGGACCCGGAAAATGAAGACGGCTATGTTGAGCTTTCTCTAAAAGAAGCTAACCAGGAAAAGGCCTGGCAAAAACTCAAAGAACAAAAGCAATCCCAAGAAATTATCAAAGCTAAAATTATCGGAGCCAACCGGGGCGGTTTAGTGGTGGACATAAGGGGCTTAGACGGCTTTCTGCCCGTTTCTCAATTATCCGACCAAAAATACCCCCAAATAGCCGGCGGCGATAAAAATAAAATTCTTAGCCACTTGAATAAATTTATAAACCAGGAAATCAAAGTCAAAATTATCAGCTTAAACCAAAACAGCCAGCAAATAATCGTTTCAGAAAAAGCAACAGAATGA
PROTEIN sequence
Length: 207
MFKKAKSQFLPSLKKESNLKAMKELLTAKGEAAPQLPQAGELIDGRIIELSKHSLILDLGASGTGIVYGAELKENKELLKGLKINDIVSVLVLDPENEDGYVELSLKEANQEKAWQKLKEQKQSQEIIKAKIIGANRGGLVVDIRGLDGFLPVSQLSDQKYPQIAGGDKNKILSHLNKFINQEIKVKIISLNQNSQQIIVSEKATE*