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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

431..946
DNA (516bp) protein (172aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Replicative DNA helicase [SA14-24] n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUF6_9CLOT
replicative DNA helicase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1025..2848)
DNA (1824bp) protein (608aa)
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
ATP-dependent zinc metalloprotease FtsH id=3590936 bin=GWA2_CPR4_42_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
ATP-dependent metalloprotease FtsH
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


comp(2845..3465)
DNA (621bp) protein (207aa)
rpfA; 30S ribosomal protein S1 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RNA binding S1 domain protein id=2933970 bin=GWC1_OD1_38_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S1
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_4
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3486..4274)
DNA (789bp) protein (263aa)
tRNA isopentenyltransferase MiaA; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
tRNA dimethylallyltransferase n=1 Tax=Lysinibacillus sphaericus OT4b.31 RepID=R7ZFR8_LYSSH
tRNA isopentenyltransferase MiaA
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4383..4520)
DNA (138bp) protein (46aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_6
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

4708..5352
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035D7336
beta-lactamase fold-like Zn-dependent hydrolase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
beta-lactamase fold-like Zn-dependent hydrolase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_7
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

5354..5710
DNA (357bp) protein (119aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_8
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


5725..9525
DNA (3801bp) protein (1267aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SU06_9BACT
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

9532..10977
DNA (1446bp) protein (482aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00036DE547
spermine synthase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_10
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11148..11687
DNA (540bp) protein (180aa)
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Type 11 methyltransferase id=2934018 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
methylase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11869..13167
DNA (1299bp) protein (433aa)
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
ABC transporter, solute-binding protein id=2934009 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
family 1 extracellular solute-binding protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

13277..13771
DNA (495bp) protein (165aa)
id=2933996 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
id=2933996 bin=GWC1_OD1_38_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

13822..14424
DNA (603bp) protein (201aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
transmembrane_regions 7..29 id=8574 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

14479..14832
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DNN1_9BACT
membrane protein
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_15
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(14915..16570)
DNA (1656bp) protein (552aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative uncharacterized protein id=2487770 bin=GWC2_Planctomycete_KSU_39_26 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(16639..17823)
DNA (1185bp) protein (395aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_17
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(17823..18425)
DNA (603bp) protein (201aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_18
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(18447..18830)
DNA (384bp) protein (128aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_13885_19
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(19068..19220)
DNA (153bp) protein (51aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Displaying 19 items

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