ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_17

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(11340..13850)

Top 3 Functional Annotations

Value Algorithm Source
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 836.0
  • Bit_score: 1650
  • Evalue 0.0
nde:NIDE0568 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=133444 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 841.0
  • Bit_score: 1197
  • Evalue 0.0
uvrA; excinuclease ABC subunit A similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 848.0
  • Bit_score: 853
  • Evalue 5.60e-245

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 2511
ATGGAAAATAAAATCATCATTAAAGGCGCTCGGGTTCATAATTTAAAAAATATCAACCTGGAGCTGCCGAAAAATAAAATAATTGTTTTTACCGGCGTCTCGGGGAGCGGCAAATCTTCCTTGGCTTTTGATACAATTTTTGCCGAAGGCCAAAGACGTTATATTGAATCGCTTTCTCCTTATGCTCGCCAATTTTTGGGCCAACTGGACCGAGCTGATGTTGATGAAATAATCGGGCTTTCGCCGGCTATTGCCATTGGTCAAAAAGCCCTAAGCCATAATCCGCGCTCTACGGTGGGGACCCTGACAGAAATTTACGACCATTTGCGGGTTTTGTTTGCCCGCTTGGGCGAAGTTTATTGCCCGATCTGTCAAGGAAAAATTGAAAAACTTTCCTTGGAGGAAATGGTTGATATTATTCTTGAAAAAGCCAAAAAAAATAAAGAAAAAAAAGTGAGTATTTTATCGCCGATAGTCCGCGGCCGAAAAGGGGAGTATTATCAGTTGTTTTATGATTATCTTTCTTTGGGATTTTCCGAAGCGCGGGTTGACGGCCGATTCCTGTCGCTTCACGAAAAACTGATTCTTTCCCGCTATAAGCCGCATACAATTGAGATTGTGATTGACCGGCTGATGATAAATGAAGAAAGCCGTTTGTTCGAGGCCGTGGAAAACGCCCTAAATTTCAGCCAAGGATTGGTGAATGTAGTTTTTGAAAAGAATGAATTTCTGCTTTCGTCTAAATGGACTTGCCCGAATGATAGTTTTGCTTTTCCTGAATTAGAGCCGCGTCTTTTTTCCTTTAACAGCCCTTACGGCGCCTGTCAAAGTTGTTATGGTTTGGGAAAGGCCGATTTATTTTTAAAAACGATTTGTCCTGACTGTCAGGGGAAAAGATTGAAGCCCGAGGCCTTATCGGTAAAAATCAACGGCCGAAACATCGGCGAGCTTGCTACTCTCCCCATTGATAAGCTAACTGAATTTTTTAATGATTATGAAAAGAGTTTGGGCCCGCGGCAAAAAATAATCGGGCAAAACGTGCTTAAAGAAATTAAGGACCGTTTGGACTTTTTATTAATGATTGGGCTGAATTATTTGTCGCTTGAGCGCGAAGCAGAAACGCTTTCCGGCGGCGAAGCCCAAAGGATTCGCCTGTCTTCTCAAATCGGCTCTCATTTATCCAACACTCTCTATGTCCTTGATGAACCAACCATCGGACTCCACGAAAGAGACACCGAACGGCTTATCAAAACTCTTAAATCATTGAAAAATAGAGACAACACGGTGATTATAGTCGAACACGACGAACGGACTATTTTAGAATCCGATTATTTAGTTGATTTGGGCCCAATGGCCGGTAAAAGCGGCGGGGAAGTGGTGGCAGCCGGCGAGGTTAAAGAATTACTGAAAAGCGATTCTAAAAACAAAATCCTTGATTCTTTAACTTTAAAATATCTAACCGGCCAAAAAAATATTCCCTTGCCTAAAATCCGCCGCCGTAAGATTCACGAAAAACTGACCATTATCGGCGGCCGGGCCAATAATTTAAAAAATATCAATGTAGAAATTCCGCTTCGCCGCCTGGTTTGTTTAACCGGCGTCTCGGGCAGCGGTAAATCATCTCTTCTCTACGATGTTTTGTATAAAAATCTTCAGCGAATAAAATCGCGGCTGAATCAGCCATTAGGAAATGTCAGTCGGATTTTAGGCGCCGAATATATTGATAAGGCGATTATGGTTGACCAGTCGCCGATCGGCCGGACCCCGCGCTCTAACCCGGCCACCTATACCGGTATTTTCACTCCAATCCGTCAGTTTTTCGCCCAATTGCCGCAAGCCCGGGAAAGAGGCTATGCGGCCTCTCGTTTTTCTTTTAATGTCTCTGCAACTAACGGAGGCGGCCGTTGCGAAGCCTGCCAAGGCGCTGGTCATAATCTGATTGAGATGCATTTTCTACCGCCGGTTTTAGTCCAGTGCGAGGTCTGCCACGGCAAAAGATTTAACCGGGAAACTCTACAGGTTAAATATAAAAAGAAAAACATCAGTGAGATTTTGGAAATGACCATTGATGAAGCGGCTGATTTTTTCAAAAATATTTATCAAATTCATGATAAAATGAAGGTCTTGCAGAATGTTGGCTTGGGCTATCTTTGTTTAGGTCAAAGCGCCACCACTCTTTCCGGCGGCGAAGCCCAAAGAATCAAACTCTCCAGAGAATTAACCCACACTTTAGGCAAAAAGAATATATATCTTTTAGACGAGCCGACAGTCGGCCTGCATTACCATGATATAGAAATGCTTTTGATGGTTTTAAATAAATTAGTGGAAAGAGGAAACACCGTGGCCATGATTGAACACAATATGCATATCATTAAATCGGCCGATTATATTATTGATTTGGGTCCGGAAGGCGGCGAATTTGGCGGCCGACTAATTGCTAAGGGCCTGCCCGAGGAAGTTATTAAAAATGAGCAGAGCTTTACCGGAAAATATCTAAAAAAGTTTTTATAA
PROTEIN sequence
Length: 837
MENKIIIKGARVHNLKNINLELPKNKIIVFTGVSGSGKSSLAFDTIFAEGQRRYIESLSPYARQFLGQLDRADVDEIIGLSPAIAIGQKALSHNPRSTVGTLTEIYDHLRVLFARLGEVYCPICQGKIEKLSLEEMVDIILEKAKKNKEKKVSILSPIVRGRKGEYYQLFYDYLSLGFSEARVDGRFLSLHEKLILSRYKPHTIEIVIDRLMINEESRLFEAVENALNFSQGLVNVVFEKNEFLLSSKWTCPNDSFAFPELEPRLFSFNSPYGACQSCYGLGKADLFLKTICPDCQGKRLKPEALSVKINGRNIGELATLPIDKLTEFFNDYEKSLGPRQKIIGQNVLKEIKDRLDFLLMIGLNYLSLEREAETLSGGEAQRIRLSSQIGSHLSNTLYVLDEPTIGLHERDTERLIKTLKSLKNRDNTVIIVEHDERTILESDYLVDLGPMAGKSGGEVVAAGEVKELLKSDSKNKILDSLTLKYLTGQKNIPLPKIRRRKIHEKLTIIGGRANNLKNINVEIPLRRLVCLTGVSGSGKSSLLYDVLYKNLQRIKSRLNQPLGNVSRILGAEYIDKAIMVDQSPIGRTPRSNPATYTGIFTPIRQFFAQLPQARERGYAASRFSFNVSATNGGGRCEACQGAGHNLIEMHFLPPVLVQCEVCHGKRFNRETLQVKYKKKNISEILEMTIDEAADFFKNIYQIHDKMKVLQNVGLGYLCLGQSATTLSGGEAQRIKLSRELTHTLGKKNIYLLDEPTVGLHYHDIEMLLMVLNKLVERGNTVAMIEHNMHIIKSADYIIDLGPEGGEFGGRLIAKGLPEEVIKNEQSFTGKYLKKFL*