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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(117..767)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B657E3
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(760..1704)
DNA (945bp) protein (315aa)
Thioredoxin-disulfide reductase (EC:1.8.1.9)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FEC16
glucose-inhibited division protein A Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1938..2393)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036613FC
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_4
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(2420..3961)
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=B6EWV4_9BACT id=5087263 bin=GWF1_OP11_31_35_complete species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4077..5204)
DNA (1128bp) protein (376aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WUZ9_ALIAD
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_6
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(5168..5677)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036A71E7
NifU-like protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
nitrogen fixation protein NifU and related proteins
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_7
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(5811..7031)
DNA (1221bp) protein (407aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
iscS; cysteine desulfurase (EC:2.8.1.7)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F7E31
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_8
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7050..7157)
DNA (108bp) protein (36aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7147..7308)
DNA (162bp) protein (54aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_10
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7543..8013)
DNA (471bp) protein (157aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8233..8808)
DNA (576bp) protein (192aa)
Superoxide dismutase (EC:1.15.1.1) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase, Fe-Mn family id=3506691 bin=GWC1_OD1_38_17 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8813..9028)
DNA (216bp) protein (72aa)
NAD(P)H quinone oxidoreductase n=1 Tax=Desulfobacter curvatus RepID=UPI0003777099
flavoprotein WrbA; K03809 Trp repressor binding protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
flavoprotein WrbA
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8973..9368)
DNA (396bp) protein (132aa)
flavoprotein WrbA, protein; K03809 Trp repressor binding protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Flavoprotein WrbA id=4343071 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
flavoprotein WrbA
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(9368..9700)
DNA (333bp) protein (111aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FLE5_9BACT
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_15
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(9678..10052)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FK94_9BACT
FUR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
FUR family transcriptional regulator
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(10139..11302)
DNA (1164bp) protein (388aa)
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
endonuclease id=15190348 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
excinuclease ABC subunit C
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_17
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11340..13850)
DNA (2511bp) protein (837aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
nde:NIDE0568 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=133444 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
uvrA; excinuclease ABC subunit A
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_18
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(14098..15954)
DNA (1857bp) protein (619aa)
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=15190340 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
uvrB; excinuclease ABC subunit B
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_19
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(16378..16869)
DNA (492bp) protein (164aa)
SAM-dependent methyltransferase (EC:2.1.1.-) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
SAM-dependent methyltransferase (EC:2.1.1.-)
Putative Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K0J0_9BACT
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_20
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(17169..17846)
DNA (678bp) protein (226aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein id=5801743 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_21
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(17890..18531)
DNA (642bp) protein (214aa)
hydrolase n=1 Tax=Anaerococcus sp. PH9 RepID=UPI0002F31E62
HAD hydrolase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
HAD hydrolase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_22
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(18528..18974)
DNA (447bp) protein (149aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_23
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(19079..20317)
DNA (1239bp) protein (413aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative ABC transporter permease protein id=3309813 bin=GWA1_ZB2_49_26 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_24
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(20571..21254)
DNA (684bp) protein (228aa)
putative macrolide efflux ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Macrolide export ATP-binding/permease protein MacB id=3736880 bin=GWC2_OD1_43_27 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
putative macrolide efflux ABC transporter ATP-binding protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_25
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(21361..23100)
DNA (1740bp) protein (580aa)
FeeC n=1 Tax=uncultured bacterium RepID=Q8KP07_9BACT id=133952 bin=ACD81 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RND family efflux transporter MFP subunit Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RND family efflux transporter MFP subunit
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_26
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(23222..24214)
DNA (993bp) protein (331aa)
Hexose-6-phosphate isomerase; K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Bifunctional phosphoglucose/phosphomannose isomerase id=3423624 bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Hexose-6-phosphate isomerase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_8105_27
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(24153..25448)
DNA (1296bp) protein (432aa)
hypothetical protein; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
gdhA; glutamate dehydrogenase; K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] id=5084689 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
gdhA; hypothetical protein
Displaying 27 items

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