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RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_70570_3

Organism: Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25

near complete RP 38 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(2222..2821)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 403
  • Evalue 2.40e-109
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 184.0
  • Bit_score: 169
  • Evalue 4.10e-39
RNA polymerase sigma factor SigW similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 179.0
  • Bit_score: 99
  • Evalue 1.10e-18

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Taxonomy

R_RIF_OD1_13_50_25 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAAGAAGTCATATCTCGACGACCCGAAAGACAGCGATCCGAAAAACATGAAAGACCAAGATATCCTTCGGGCGTCTTTGGATGAGCCAGCGCTTTTTGAGATTTTGGTCGAGCGATACCACGATCCCCTGTATCGCGCGGCGTTCAAAATTGTGCGTAACCCCGAGGAATCAGAAGATATCGTCCAGGAAGCATTTGTCAAAATGTATAAAAACGCCGAGAAGTTCCAGAAGCTCGAGGGAATCGAATTCAAATCGTGGGCCTATAAAGTGACAATCAATAACGCGATCACCCACTACCGAAAACTCAAAAAAGGCGAGATACTTTCGGAGGATCCAAGCGTGTTTCAGCACGCCCCAGGCGAAGACTTTGACTCGCTCATATGGCGCAATTCAGATATGAAAACGATAGTCGCAGGAACGCTTGAGCGTATGCCGCCGCATTTAAAAACGGTTCTCGCAAGCTACTATTTCGATGACAAATCGTACCAAATGATCGCAAAAGACGAAAATATTTCAATCCCTACTTTGAAGATGCGGCTCTTCCGCGCGAAACGAATCTTCAAAAAATTATTAGATGAAGACACGACTCCCGTATAG
PROTEIN sequence
Length: 200
MKKSYLDDPKDSDPKNMKDQDILRASLDEPALFEILVERYHDPLYRAAFKIVRNPEESEDIVQEAFVKMYKNAEKFQKLEGIEFKSWAYKVTINNAITHYRKLKKGEILSEDPSVFQHAPGEDFDSLIWRNSDMKTIVAGTLERMPPHLKTVLASYYFDDKSYQMIAKDENISIPTLKMRLFRAKRIFKKLLDEDTTPV*