ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_70570_4

Organism: Candidatus Sungbacteria bacterium RIFCSPHIGHO2_01_FULL_50_25

near complete RP 38 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: 2898..3605

Top 3 Functional Annotations

Value Algorithm Source
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 477
  • Evalue 1.50e-131
rluD; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 235.0
  • Bit_score: 186
  • Evalue 6.40e-45
Pseudouridine synthase id=1968273 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 234.0
  • Bit_score: 202
  • Evalue 5.20e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_13_50_25 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGAAAATGCAAGCAATTCCAATTCTTTTTGAGGATACAAATTTAATCGTGCTGAATAAGCCGGCCGGTATAGCGGTGCACGGCGGGCCGAATGTGAAAGGAATTACTGTCGTTGATTTTTTGGTTCGGCATTTTCCAGAAGTAAAGAGTGTCGGCGATGACCCGGTGCGGCCTGGTATTGTGCATCGGCTCGACAAAGATACATCTGGTATTATGGTTGTTGCGCGCAATCCGGACGCCTTTGGGGAATTAAAGTCGCTTTTTAAGGAGCGGCGCATCGAAAAAACGTATCTCGCAGTTGTGTGCGGAAGACCGAAAAGTCGTGTGGGAATAATTTCTTATTCCATAGGCCGCGACGCAAAAAATCCGACTCGGCGGGGCGCTGGCGGAGGCCGCGCCAAAATTCGTGGAGAGCGCGAAGCTGAAACCCACTATCGAGTTTTGAAAACAGGGGGTGCATATTCGCTTCTTGAAGTCACGCCGAAAACCGGGCGCACGCACCAGATCCGCGTGCATTTAAAAGCAATCGGGTATCCGATTGCGTGTGATCGCGTCTACGGTGGGAAGAATGTGTGTTGTCCGGAAGGCGCGGGGCGTCAGATGCTACACGCTCAGTCGCTTTCATTCAGTTTTCCTGAAGGCAGGAGAATCAAATTCGAGGCAGACCCGCCCGATGATTTTATACTTGCGATGGAAAAGATTTTGTGA
PROTEIN sequence
Length: 236
MKMQAIPILFEDTNLIVLNKPAGIAVHGGPNVKGITVVDFLVRHFPEVKSVGDDPVRPGIVHRLDKDTSGIMVVARNPDAFGELKSLFKERRIEKTYLAVVCGRPKSRVGIISYSIGRDAKNPTRRGAGGGRAKIRGEREAETHYRVLKTGGAYSLLEVTPKTGRTHQIRVHLKAIGYPIACDRVYGGKNVCCPEGAGRQMLHAQSLSFSFPEGRRIKFEADPPDDFILAMEKIL*