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RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_1
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

296..511
DNA (216bp) protein (72aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_2
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

573..929
DNA (357bp) protein (119aa)
Single-stranded DNA-binding protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6C019_DESAD
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
single-strand binding protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_3
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(955..2223)
DNA (1269bp) protein (423aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP19_KORVE
major facilitator transporter Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
major facilitator superfamily transporter
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_4
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(2287..3567)
DNA (1281bp) protein (427aa)
Peptidase families S8 and S53 n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E4A0_9ARCH
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
peptidase S8/S53 subtilisin kexin sedolisin
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_5
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(3654..5384)
DNA (1731bp) protein (577aa)
cysI; sulfite reductase (NADPH) hemoprotein beta-component Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
cysI; sulfite reductase (NADPH) hemoprotein beta-component id=14426126 bin=bin1_lowGC species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
cysI; sulfite reductase (NADPH) hemoprotein beta-component
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_6
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

5579..5875
DNA (297bp) protein (99aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4P1_HERA2
LuxR family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
LuxR family transcriptional regulator
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_7
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

6084..6380
DNA (297bp) protein (99aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJU9_MOOTA
two component LuxR family transcriptional regulator; K07692 two-component system, NarL family, response regulator DegU Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
two component LuxR family transcriptional regulator
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_8
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(6377..6601)
DNA (225bp) protein (75aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_9
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(6659..7147)
DNA (489bp) protein (163aa)
3-dehydroquinate dehydratase (EC:4.2.1.10) Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=3685915 bin=GWF2_OP3_38_59 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_10
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

7296..7502
DNA (207bp) protein (69aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_11
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

7550..8296
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HID1_9SPIR
3-deoxy-manno-octulosonate cytidylyltransferase
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_12
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(8289..9773)
DNA (1485bp) protein (495aa)
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_11 n=1 Tax=Oikopleura dioica RepID=E4X5G7_OIKDI
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_13
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists


comp(9715..10866)
DNA (1152bp) protein (384aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPHIGHO2_02
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J3N5_DESRM
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_14
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(10900..11319)
DNA (420bp) protein (140aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_15
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

11651..11956
DNA (306bp) protein (102aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_16
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(11986..13296)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F073_9BACT
type II secretion system F domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
type II secretion system F domain-containing protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_17
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

13538..16012
DNA (2475bp) protein (825aa)
drm:Dred_0731 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=18948 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
single-stranded-DNA-specific exonuclease RecJ Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
single-stranded-DNA-specific exonuclease RecJ
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_18
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

16019..16603
DNA (585bp) protein (195aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] id=20268 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_19
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

16823..20749
DNA (3927bp) protein (1309aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_20
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

20812..21267
DNA (456bp) protein (152aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_21
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(21279..24344)
DNA (3066bp) protein (1022aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_22
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

24451..24759
DNA (309bp) protein (103aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=uncultured bacterium RepID=K2E070_9BACT
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_23
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

24862..25719
DNA (858bp) protein (286aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_24
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

25844..27538
DNA (1695bp) protein (565aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_25
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

27637..28431
DNA (795bp) protein (265aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_trna_1
unknown

Not on your lists

comp(28438..28509)
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_26
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(28623..28976)
DNA (354bp) protein (118aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_27
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(28977..29291)
DNA (315bp) protein (105aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_28
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

29479..30528
DNA (1050bp) protein (350aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_7705_29
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists


30576..31712
DNA (1137bp) protein (379aa)
recA protein; K03553 recombination protein RecA Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
cce:Ccel_0676 RecA protein; K03553 recombination protein RecA id=18954 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
protein RecA
Displaying items 1-30 of 42 in total

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