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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_1
R_WOR_2_45_21, WOR-2, Bacteria

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2..514
DNA (513bp) protein (171aa)
Shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
shikimate kinase (EC:2.7.1.71)
Shikimate kinase id=2293377 bin=GWB2_CP_45_9 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_2
R_WOR_2_45_21, WOR-2, Bacteria

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511..1713
DNA (1203bp) protein (401aa)
SMF family protein involved in DNA uptake; K04096 DNA processing protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Strongly similar to competence protein DprA id=2293376 bin=GWB2_CP_45_9 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
SMF family protein involved in DNA uptake
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_3
R_WOR_2_45_21, WOR-2, Bacteria

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1755..3788
DNA (2034bp) protein (678aa)
DNA topoisomerase I, bacterial Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
DNA topoisomerase id=4652266 bin=GWC2_OP3_44_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
DNA topoisomerase I, bacterial
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_4
R_WOR_2_45_21, WOR-2, Bacteria

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3793..4653
DNA (861bp) protein (287aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Tyrosine recombinase XerC id=3681674 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
tyrosine recombinase XerC
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_5
R_WOR_2_45_21, WOR-2, Bacteria

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4678..6081
DNA (1404bp) protein (468aa)
waaA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.4.-.-); K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_c
waaA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.4.-.-)
3-deoxy-D-manno-octulosonic-acid transferase id=4652268 bin=GWC2_OP3_44_8 species=Dialister invisus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_6
R_WOR_2_45_21, WOR-2, Bacteria

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6099..7220
DNA (1122bp) protein (374aa)
putative 3-deoxy-D-manno-octulosonic-acid (KDO) transferase/tetraacyldisaccharide-1-P 4'-kinase (EC:2.4.-.- 2.7.1.130) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
putative 3-deoxy-D-manno-octulosonic-acid (KDO) transferase/tetraacyldisaccharide-1-P 4'-kinase (EC:2.4.-.- 2.7.1.130)
Tetraacyldisaccharide 4'-kinase id=4652270 bin=GWC2_OP3_44_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_7
R_WOR_2_45_21, WOR-2, Bacteria

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7174..9102
DNA (1929bp) protein (643aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Lipid A biosynthesis acyltransferase id=3681734 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
lipid A biosynthesis acyltransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_8
R_WOR_2_45_21, WOR-2, Bacteria

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9099..11216
DNA (2118bp) protein (706aa)
putative glycosyltransferase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Glycosyl transferase id=4652272 bin=GWC2_OP3_44_8 species=Acetobacter tropicalis genus=Acetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
group 1 glycosyl transferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_9
R_WOR_2_45_21, WOR-2, Bacteria

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11287..12381
DNA (1095bp) protein (365aa)
glycosyl transferase group 1 protein (EC:2.4.1.-) Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
glycosyl transferase group 1 protein (EC:2.4.1.-)
Glycosyl transferase, group 1 id=3681739 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_10
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

12369..13178
DNA (810bp) protein (270aa)
polysaccharide deacetylase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
Polysaccharide deacetylase id=3681741 bin=GWF2_OP3_43_52 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
polysaccharide deacetylase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_11
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

13179..14192
DNA (1014bp) protein (338aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ADP-heptose--lipopolysaccharide heptosyltransferase id=3681745 bin=GWF2_OP3_43_52 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ADP-heptose--LPS heptosyltransferase
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_12
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

14290..15921
DNA (1632bp) protein (544aa)
ykpA; ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ATPase component of ABC transporters with duplicated ATPase domain id=2850114 bin=GWF2_OP3_43_52 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ykpA; ABC transporter ATP-binding protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_13
R_WOR_2_45_21, WOR-2, Bacteria

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16010..17320
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E718
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_14
R_WOR_2_45_21, WOR-2, Bacteria

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17317..17877
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036CBA4F
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_15
R_WOR_2_45_21, WOR-2, Bacteria

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17825..17950
DNA (126bp) protein (42aa)
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_16
R_WOR_2_45_21, WOR-2, Bacteria

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17947..18921
DNA (975bp) protein (325aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ADP-heptose--lipopolysaccharide heptosyltransferase id=2933827 bin=GWC2_OP3-like_45_7 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
glycosyl transferase family protein
RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_4741_17
R_WOR_2_45_21, WOR-2, Bacteria

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18896..19078
DNA (183bp) protein (61aa)
lipopolysaccharide heptosyltransferase III; K02849 heptosyltransferase III [EC:2.4.-.-] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
ADP-heptose--lipopolysaccharide heptosyltransferase id=4652276 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
lipopolysaccharide heptosyltransferase III
Displaying 17 items

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