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RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_1
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_2
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(152..1423)
DNA (1272bp) protein (424aa)
zinc protease n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7875B
peptidase M16 domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
peptidase M16 domain-containing protein
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_3
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(1420..1833)
DNA (414bp) protein (138aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Putative Holliday junction resolvase n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3ELM1_GEOS4
Holliday junction resolvase YqgF
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_4
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(2279..3286)
DNA (1008bp) protein (336aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22 5.3.1.8); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22 5.3.1.8)
Mannose-1-phosphate guanylyltransferase (GDP) n=3 Tax=Crocosphaera watsonii RepID=T2IPC1_CROWT
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_5
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(3287..4084)
DNA (798bp) protein (266aa)
tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Tryptophan synthase alpha chain n=1 Tax=Geobacter sp. (strain M18) RepID=E8WLS7_GEOS8
tryptophan synthase subunit alpha
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_6
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(4081..5253)
DNA (1173bp) protein (391aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
tryptophan synthase subunit beta (EC:4.2.1.20)
tryptophan synthase subunit beta n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4B4AE
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_7
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(5231..5848)
DNA (618bp) protein (206aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDE8_AMMDK
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_8
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(5835..6617)
DNA (783bp) protein (261aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3Z7_DESAP
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_9
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(6614..7612)
DNA (999bp) protein (333aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
anthranilate phosphoribosyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000371A8E7
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_10
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(7656..8225)
DNA (570bp) protein (190aa)
anthranilate synthase component II; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Glutamine amidotransferase of anthranilate synthase id=4011946 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
trpG; anthranilate synthase component II
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_11
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(8222..9718)
DNA (1497bp) protein (499aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E6B4_GEOLS
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_12
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(9705..10109)
DNA (405bp) protein (135aa)
phosphoribosyl-ATP diphosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Similar to bifunctional phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphatase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK9_9BACT
phosphoribosyl-ATP diphosphatase
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_13
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(10106..10873)
DNA (768bp) protein (256aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=HIS6_GEODF
imidazole glycerol phosphate synthase subunit HisF
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_14
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(10855..11589)
DNA (735bp) protein (245aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=HIS4_SYNAS
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_15
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(11583..12221)
DNA (639bp) protein (213aa)
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-) Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EX40_9BACT
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_16
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(12308..12937)
DNA (630bp) protein (210aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase id=3098762 bin=GWA2_OP3_52_12 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_17
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(12934..13299)
DNA (366bp) protein (122aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase id=2273651 bin=GWB2_CP_45_9 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_18
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(13296..14159)
DNA (864bp) protein (288aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase id=4155133 bin=GWC2_OP3_44_8 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_19
R_OP3X_63_14, OP3X, Bacteria

Not on your lists


comp(14156..16702)
DNA (2547bp) protein (849aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Alanine--tRNA ligase id=3098766 bin=GWA2_OP3_52_12 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
alaS; alanyl-tRNA synthetase
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_20
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(16699..17097)
DNA (399bp) protein (133aa)
Regulatory protein RecX n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UNT0_9MICO
regulatory protein RecX; K03565 regulatory protein Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
regulatory protein RecX
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_21
R_OP3X_63_14, OP3X, Bacteria

Not on your lists


comp(17187..18239)
DNA (1053bp) protein (351aa)
recA protein; K03553 recombination protein RecA Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Protein RecA id=4039535 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
recA; protein RecA
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_22
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

18460..19707
DNA (1248bp) protein (416aa)
competence damage-inducible protein A; K03742 competence/damage-inducible protein CinA Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
cinA; competence-damage inducible protein id=14430506 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
competence damage-inducible protein A
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_23
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(19650..20345)
DNA (696bp) protein (232aa)
GMP synthase family protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9L6_DESTA
GMP synthase family protein Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
GMP synthase family protein
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_24
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(20336..20773)
DNA (438bp) protein (146aa)
pgpA; phosphatidylglycerophosphatase A (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
phosphatidylglycerophosphatase (EC:3.1.3.27)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JG72_9GAMM
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_25
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(20763..21344)
DNA (582bp) protein (194aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPHIGHO2_02_FULL_O
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=4705334 bin=GWC2_OP3_44_8 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_26
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(21319..22656)
DNA (1338bp) protein (446aa)
MiaB3; 2-methylthioadenine synthetase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000373D334
MiaB3; 2-methylthioadenine synthetase
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_27
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(22649..23404)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E59200
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_28
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(23382..25379)
DNA (1998bp) protein (666aa)
cell division FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
Strongly similar to DNA translocase cell division ATPase ftsK id=2219343 bin=GWB2_CP_45_9 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
cell division FtsK/SpoIIIE
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_29
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(25622..26077)
DNA (456bp) protein (152aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CRF6_THEYO
RIFCSPHIGHO2_02_FULL_CPR_63_14_rifcsphigho2_02_scaffold_10938_30
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(26028..28256)
DNA (2229bp) protein (743aa)
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=2219341 bin=GWB2_CP_45_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Displaying items 1-30 of 43 in total

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