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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3..197
DNA (195bp) protein (65aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

307..1005
DNA (699bp) protein (233aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036167B2
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036167B2
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1113..1664
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B5D1_9PROT
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B5D1_9PROT
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1661..2377
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLQ7_THISH
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLQ7_THISH
hypothetical protein; K09004 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K09004 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2414..2854
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00037437C5
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00037437C5
hypothetical protein; K09004 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K09004 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2983..4365
DNA (1383bp) protein (461aa)
MscS Mechanosensitive ion channel n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z182_DESAT
MscS Mechanosensitive ion channel n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z182_DESAT
MscS Mechanosensitive ion channel Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
MscS Mechanosensitive ion channel Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4256..4696)
DNA (441bp) protein (147aa)
ADP-ribose pyrophosphatase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YYV4_9GAMM
ADP-ribose pyrophosphatase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YYV4_9GAMM
ADP-ribose pyrophosphatase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ADP-ribose pyrophosphatase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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4813..6003
DNA (1191bp) protein (397aa)
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Fatty acid desaturase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6Z8_9NEIS
Fatty acid desaturase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6Z8_9NEIS
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6071..6625)
DNA (555bp) protein (185aa)
HNH endonuclease domain-containing protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G791_9GAMM
HNH endonuclease domain-containing protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G791_9GAMM
HNH endonuclease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
HNH endonuclease Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6855..7022)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Marinobacterium stanieri RepID=UPI0002559646
50S ribosomal protein L33 n=1 Tax=Marinobacterium stanieri RepID=UPI0002559646
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7024..7260)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U8Q7_XANAP
50S ribosomal protein L28 n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U8Q7_XANAP
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7550..8254)
DNA (705bp) protein (235aa)
UPF0758 protein Noc_0236 n=2 Tax=Nitrosococcus oceani RepID=Y236_NITOC
UPF0758 protein Noc_0236 n=2 Tax=Nitrosococcus oceani RepID=Y236_NITOC
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8308..9648
DNA (1341bp) protein (447aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.3
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.3
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9648..10103
DNA (456bp) protein (152aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10262..11782
DNA (1521bp) protein (507aa)
diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
diguanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Putative diguanylate cyclase (GGDEF domain) id=1329468 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Putative diguanylate cyclase (GGDEF domain) id=1329468 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_8026_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11931..12854
DNA (924bp) protein (308aa)
phosphoglucomutase; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphoglucomutase; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=12494561 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=12494561 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Displaying 16 items

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