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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127..2265)
DNA (2139bp) protein (713aa)
Twitching motility protein PilJ n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DEH8_9GAMM
Twitching motility protein PilJ n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DEH8_9GAMM
methyl-accepting chemotaxis protein; K02660 twitching motility protein PilJ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
methyl-accepting chemotaxis protein; K02660 twitching motility protein PilJ Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2349..2891)
DNA (543bp) protein (181aa)
protein PilI n=1 Tax=Pseudomonas sp. 313 RepID=UPI000310D441
protein PilI n=1 Tax=Pseudomonas sp. 313 RepID=UPI000310D441
pilI; type IV pili signal transduction protein PilI; K02659 twitching motility protein PilI Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pilI; type IV pili signal transduction protein PilI; K02659 twitching motility protein PilI Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3019..3381)
DNA (363bp) protein (121aa)
Pilus protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6APB2_9PROT
Pilus protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6APB2_9PROT
pilH; pilus protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pilH; pilus protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3447..3797)
DNA (351bp) protein (117aa)
pilus response regulator PilG n=1 Tax=Arhodomonas aquaeolei RepID=UPI000372CFF8
pilus response regulator PilG n=1 Tax=Arhodomonas aquaeolei RepID=UPI000372CFF8
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4250..5587
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SXY5_9GAMM
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SXY5_9GAMM
ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5796..6764
DNA (969bp) protein (323aa)
glutathione synthetase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glutathione synthetase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glutathione synthetase (EC:6.3.2.3)
glutathione synthetase (EC:6.3.2.3)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6926..7816
DNA (891bp) protein (297aa)
TonB family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZY6_9PROT
TonB family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZY6_9PROT
TonB family protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
TonB family protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8233..8796
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000373C3C3
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000373C3C3
transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8793..9230
DNA (438bp) protein (146aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Holliday junction resolvase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A44669
Holliday junction resolvase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A44669
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9227..9724
DNA (498bp) protein (166aa)
Uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase (EC:2.4.2.9)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9721..10749
DNA (1029bp) protein (343aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10746..12032
DNA (1287bp) protein (429aa)
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Dihydroorotase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4Y9_NITHN
Dihydroorotase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4Y9_NITHN
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12189..13304)
DNA (1116bp) protein (372aa)
Pilus retraction protein PilT n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFZ4_AZOSU
Pilus retraction protein PilT n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFZ4_AZOSU
pilus retraction protein PilT; K02670 twitching motility protein PilU Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pilus retraction protein PilT; K02670 twitching motility protein PilU Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13301..14371)
DNA (1071bp) protein (357aa)
twitching motility protein PilT n=1 Tax=Leeia oryzae RepID=UPI000363B5B0
twitching motility protein PilT n=1 Tax=Leeia oryzae RepID=UPI000363B5B0
Twitching motility protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Twitching motility protein PilT; K02669 twitching motility protein PilT Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14570..15421
DNA (852bp) protein (284aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15418..15975
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BQN5_9GAMM
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BQN5_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16401..18374
DNA (1974bp) protein (658aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DBD4_9GAMM
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DBD4_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18483..19547)
DNA (1065bp) protein (355aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19859..20602)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00035D0303
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00035D0303
Sel1 domain-containing protein; K07126 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Sel1 domain-containing protein; K07126 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21148..22695
DNA (1548bp) protein (516aa)
Major facilitator family transporter n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFK8_MYXSD
Major facilitator family transporter n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFK8_MYXSD
major facilitator family transporter Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
major facilitator family transporter Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22705..22878
DNA (174bp) protein (58aa)
glutaredoxin 3 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glutaredoxin 3 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
glutaredoxin 3 id=12492968 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutaredoxin 3 id=12492968 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23007..23333)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABP0_ALKEH
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABP0_ALKEH
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23339..24112)
DNA (774bp) protein (258aa)
exodeoxyribonuclease III (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
exodeoxyribonuclease III (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
exodeoxyribonuclease III (EC:4.2.99.18)
exodeoxyribonuclease III (EC:4.2.99.18)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24231..24872
DNA (642bp) protein (214aa)
orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25058..25438
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_26
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25451..25897)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUC2_9GAMM
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUC2_9GAMM
cell shape determination protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
cell shape determination protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_27
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26253..27005)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DBC9_9GAMM
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DBC9_9GAMM
hypothetical protein; K07090 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K07090 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_28
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27194..27853
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3A8_NITHN
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3A8_NITHN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_29
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27878..28315)
DNA (438bp) protein (146aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Molybdopterin biosynthesis MoaE protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IQW8_9GAMM
Molybdopterin biosynthesis MoaE protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IQW8_9GAMM
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_2883_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28312..28548)
DNA (237bp) protein (79aa)
Molybdopterin converting factor, subunit 1 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G512_9GAMM
Molybdopterin converting factor, subunit 1 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G512_9GAMM
molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
molybdopterin converting factor, subunit 1; K03636 molybdopterin synthase sulfur carrier subunit Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying items 1-30 of 31 in total

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