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RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..460)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4T0_RAMTT
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4T0_RAMTT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(457..1932)
DNA (1476bp) protein (492aa)
Candidate membrane protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4T1_RAMTT
Candidate membrane protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4T1_RAMTT
membrane protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
membrane protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2182..2877
DNA (696bp) protein (232aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA65_9PROT
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA65_9PROT
sdhB; succinate dehydrogenase and fumarate reductase iron-sulfur protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
sdhB; succinate dehydrogenase and fumarate reductase iron-sulfur protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2877..3185
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7615
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7615
hypothetical protein; K09159 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein; K09159 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3163..3609
DNA (447bp) protein (149aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3563..5203)
DNA (1641bp) protein (547aa)
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase (EC:1.4.3.16)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5417..5995
DNA (579bp) protein (193aa)
RNA polymerase sigma factor AlgU n=1 Tax=Lamprocystis purpurea RepID=UPI000367A95A
RNA polymerase sigma factor AlgU n=1 Tax=Lamprocystis purpurea RepID=UPI000367A95A
RNA polymerase, sigma-24 subunit, RpoE Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RNA polymerase, sigma-24 subunit, RpoE Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5998..6546
DNA (549bp) protein (183aa)
Sigma factor RpoE negative regulatory protein RseA n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FE82_9GAMM
Sigma factor RpoE negative regulatory protein RseA n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FE82_9GAMM
negative regulator of sigma E activity Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
negative regulator of sigma E activity Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6543..7523
DNA (981bp) protein (327aa)
MucB/RseB family n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N4S1_9GAMM
MucB/RseB family n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N4S1_9GAMM
Sigma factor RpoE negative regulatory protein RseB precursor; K03598 sigma-E factor negative regulatory protein RseB Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Sigma factor RpoE negative regulatory protein RseB precursor; K03598 sigma-E factor negative regulatory protein RseB Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8186..9589
DNA (1404bp) protein (468aa)
protease Do (EC:3.4.21.108); K01362 [EC:3.4.21.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
protease Do (EC:3.4.21.108); K01362 [EC:3.4.21.-] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
protease Do (EC:3.4.21.108)
protease Do (EC:3.4.21.108)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9805..11607
DNA (1803bp) protein (601aa)
Elongation factor 4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=LEPA_NITMU
Elongation factor 4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=LEPA_NITMU
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11612..12442
DNA (831bp) protein (277aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
signal peptidase I (EC:3.4.21.89)
signal peptidase I (EC:3.4.21.89)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..12861
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B65831
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B65831
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12848..13531
DNA (684bp) protein (228aa)
rnc; ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rnc; ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
rnc; ribonuclease III (EC:3.1.26.3)
rnc; ribonuclease III (EC:3.1.26.3)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13531..14433
DNA (903bp) protein (301aa)
GTPase Era n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YF99_METFJ
GTPase Era n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YF99_METFJ
GTP-binding protein Era; K03595 GTP-binding protein Era Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
GTP-binding protein Era; K03595 GTP-binding protein Era Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14437..15207
DNA (771bp) protein (257aa)
DNA repair protein RecO n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K8M4_NITWC
DNA repair protein RecO n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K8M4_NITWC
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15188..15919
DNA (732bp) protein (244aa)
pyridoxine 5'-phosphate synthase (EC:2.6.99.2) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyridoxine 5'-phosphate synthase (EC:2.6.99.2) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Pyridoxine 5'-phosphate synthase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y6Q0_THIV6
Pyridoxine 5'-phosphate synthase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y6Q0_THIV6
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_18
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16053..16433
DNA (381bp) protein (127aa)
holo-acyl-carrier-protein synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
holo-acyl-carrier-protein synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
holo-acyl-carrier-protein synthase (EC:2.7.8.7)
holo-acyl-carrier-protein synthase (EC:2.7.8.7)
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16514..17191
DNA (678bp) protein (226aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_20
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17194..17424)
DNA (231bp) protein (77aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_11340_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17566..17958)
DNA (393bp) protein (131aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying 21 items

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